BLASTX nr result

ID: Coptis25_contig00033067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033067
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18210.3| unnamed protein product [Vitis vinifera]              232   1e-58
ref|XP_002265483.1| PREDICTED: uncharacterized protein LOC100257...   232   1e-58
ref|XP_003555406.1| PREDICTED: uncharacterized protein LOC100800...   226   6e-57
ref|XP_002300916.1| predicted protein [Populus trichocarpa] gi|2...   226   8e-57
ref|XP_003536421.1| PREDICTED: uncharacterized protein LOC100808...   225   1e-56

>emb|CBI18210.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score =  232 bits (591), Expect = 1e-58
 Identities = 118/217 (54%), Positives = 149/217 (68%), Gaps = 16/217 (7%)
 Frame = +3

Query: 60  SISTTILVDGLAEWKNPSVLVGDTIIFRHKLHYNLYIFQNKRAFKVCNFTQAILLTKPNS 239
           S+STT++VDG++EWKNP V VGD+IIFRH+ HYNLY+FQN+ AF +CNFTQA LLTKPNS
Sbjct: 17  SLSTTVVVDGVSEWKNPIVHVGDSIIFRHRNHYNLYVFQNREAFNLCNFTQATLLTKPNS 76

Query: 240 NSFTWHPSRPGYFYFSFNNGSLKACRDGDKLPIRVS---------LTPPELAPQEAPSPS 392
            S+TWHPSR G+FYFSFNNGSL+AC+   KL I+V           T P L P+ AP+P+
Sbjct: 77  TSYTWHPSRTGFFYFSFNNGSLEACQQAQKLAIKVQASAKPRDNWATSPALPPRAAPAPT 136

Query: 393 SGGLVSSTPATQWRFL---XXXXXXXXXXXXXXXVLPDKGGGIPFINSNPAVPLPTGETD 563
           SGG  +S+P   W F                   V+PDKG GIPFINSNPAVPLPTGE D
Sbjct: 137 SGGTPTSSPVYPWPFRPHEAAPSSAEPSASPPATVMPDKGAGIPFINSNPAVPLPTGEVD 196

Query: 564 AATIRPLPIS--SGVVQ--MVGLRSLQILLCFMVWMM 662
           +ATIRP+P S   G+VQ  +V   +   ++C ++ M+
Sbjct: 197 SATIRPVPTSGHGGLVQVKVVQFAAQMSVVCVVLVML 233


>ref|XP_002265483.1| PREDICTED: uncharacterized protein LOC100257188 [Vitis vinifera]
          Length = 238

 Score =  232 bits (591), Expect = 1e-58
 Identities = 118/217 (54%), Positives = 149/217 (68%), Gaps = 16/217 (7%)
 Frame = +3

Query: 60  SISTTILVDGLAEWKNPSVLVGDTIIFRHKLHYNLYIFQNKRAFKVCNFTQAILLTKPNS 239
           S+STT++VDG++EWKNP V VGD+IIFRH+ HYNLY+FQN+ AF +CNFTQA LLTKPNS
Sbjct: 22  SLSTTVVVDGVSEWKNPIVHVGDSIIFRHRNHYNLYVFQNREAFNLCNFTQATLLTKPNS 81

Query: 240 NSFTWHPSRPGYFYFSFNNGSLKACRDGDKLPIRVS---------LTPPELAPQEAPSPS 392
            S+TWHPSR G+FYFSFNNGSL+AC+   KL I+V           T P L P+ AP+P+
Sbjct: 82  TSYTWHPSRTGFFYFSFNNGSLEACQQAQKLAIKVQASAKPRDNWATSPALPPRAAPAPT 141

Query: 393 SGGLVSSTPATQWRFL---XXXXXXXXXXXXXXXVLPDKGGGIPFINSNPAVPLPTGETD 563
           SGG  +S+P   W F                   V+PDKG GIPFINSNPAVPLPTGE D
Sbjct: 142 SGGTPTSSPVYPWPFRPHEAAPSSAEPSASPPATVMPDKGAGIPFINSNPAVPLPTGEVD 201

Query: 564 AATIRPLPIS--SGVVQ--MVGLRSLQILLCFMVWMM 662
           +ATIRP+P S   G+VQ  +V   +   ++C ++ M+
Sbjct: 202 SATIRPVPTSGHGGLVQVKVVQFAAQMSVVCVVLVML 238


>ref|XP_003555406.1| PREDICTED: uncharacterized protein LOC100800621 [Glycine max]
          Length = 229

 Score =  226 bits (576), Expect = 6e-57
 Identities = 121/218 (55%), Positives = 148/218 (67%), Gaps = 14/218 (6%)
 Frame = +3

Query: 54  KPSISTTILVDGLAEWKNPSVLVGDTIIFRHKLHYNLYIFQNKRAFKVCNFTQAILLTKP 233
           K S STTILVDG +EWK+P+V +GD+IIF+HK HYNLYIF+N++AFK+CN TQA LL   
Sbjct: 16  KLSHSTTILVDGSSEWKSPTVSIGDSIIFKHKQHYNLYIFKNEKAFKLCNITQATLL--- 72

Query: 234 NSNSFTWHPSRPGYFYFSFNNGSLKACRDGDKLPIRV--SLTPPELAPQEAPSPSSGGLV 407
            SN FTWHPSRPG+FYF+F+NGSLKAC+D  KL I V  S   PE +P   P+PSSGG V
Sbjct: 73  -SNPFTWHPSRPGFFYFTFHNGSLKACQDSQKLAIEVASSAMAPEHSPVATPAPSSGGEV 131

Query: 408 SSTPATQWRFL----------XXXXXXXXXXXXXXXVLPDKGGGIPFINSNPAVPLPTGE 557
            S+P+  W F                          ++PDKGGG+PFINSNPAVPLPTGE
Sbjct: 132 PSSPSFPWPFRPGQEASSPGPAPQAQAQAGSPVTIPLVPDKGGGMPFINSNPAVPLPTGE 191

Query: 558 TDAATIRPLPISSGVVQ--MVGLRSLQILLCFMVWMML 665
            D+ATIRPLPI+SG  +  M+G   L I L  M  ++L
Sbjct: 192 VDSATIRPLPITSGHQEQVMIGSFGLHIALHTMALLLL 229


>ref|XP_002300916.1| predicted protein [Populus trichocarpa] gi|222842642|gb|EEE80189.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  226 bits (575), Expect = 8e-57
 Identities = 115/200 (57%), Positives = 139/200 (69%), Gaps = 20/200 (10%)
 Frame = +3

Query: 54  KPSISTTILVDGLAEWKNPSVLVGDTIIFRHKLHYNLYIFQNKRAFKVCNFTQAILLTKP 233
           +PS STTILVDG++EWK+P+V +GD+IIF+HK HY+LYIFQN+RAF +CNFTQA LLTKP
Sbjct: 7   QPSCSTTILVDGVSEWKDPNVYIGDSIIFKHKFHYSLYIFQNQRAFNICNFTQATLLTKP 66

Query: 234 NSNSFTWHPSRPGYFYFSFNNGSLKAC-RDGDKLPIRVSLTPPELAPQEAPSPS------ 392
           NS S+TW+PSRPG+FYF+FNNGSLK+C +D  KL I+VS  PP    Q  P+ S      
Sbjct: 67  NSTSYTWYPSRPGFFYFTFNNGSLKSCNQDSQKLSIKVSPAPPPPPAQLPPTASPPVPAQ 126

Query: 393 -SGGLVSSTPATQWRFL------------XXXXXXXXXXXXXXXVLPDKGGGIPFINSNP 533
             G +VSS+PA QW                              ++PDKGGGIPFINSNP
Sbjct: 127 IPGDIVSSSPAYQWPSRPRDETAFSPAPEPGGSAASSPMATVPTLMPDKGGGIPFINSNP 186

Query: 534 AVPLPTGETDAATIRPLPIS 593
           AVPLPTGE D+ATIRPLP S
Sbjct: 187 AVPLPTGEIDSATIRPLPTS 206


>ref|XP_003536421.1| PREDICTED: uncharacterized protein LOC100808387 [Glycine max]
          Length = 225

 Score =  225 bits (573), Expect = 1e-56
 Identities = 119/216 (55%), Positives = 147/216 (68%), Gaps = 12/216 (5%)
 Frame = +3

Query: 54  KPSISTTILVDGLAEWKNPSVLVGDTIIFRHKLHYNLYIFQNKRAFKVCNFTQAILLTKP 233
           K S S TILVDG +EWKNP+V +GD+IIF+HK HYNLYIF+N++AFK+CN TQA LLT P
Sbjct: 16  KFSYSATILVDGSSEWKNPTVSIGDSIIFKHKQHYNLYIFKNEKAFKLCNITQATLLTNP 75

Query: 234 NSNSFTWHPSRPGYFYFSFNNGSLKACRDGDKLPIRVSLTPPELAPQEAPSPSSGGLVSS 413
               +TWHPSRPG+FYF+F+NGSLKAC+D  KL I V  T   +AP+ +P+PSSGG V S
Sbjct: 76  ----YTWHPSRPGFFYFTFHNGSLKACQDSQKLAIEV--TSSAMAPEVSPAPSSGGEVPS 129

Query: 414 TPATQWRF----------LXXXXXXXXXXXXXXXVLPDKGGGIPFINSNPAVPLPTGETD 563
           +P+  W F                          ++PDKGGG+PFINSNPAVPLPTGE D
Sbjct: 130 SPSFPWPFHPGQEASSPGPAPQAQAQASSPVTIPLVPDKGGGMPFINSNPAVPLPTGEVD 189

Query: 564 AATIRPLPISSG--VVQMVGLRSLQILLCFMVWMML 665
           +ATIRPLPI+SG     M+G   L I L  M  ++L
Sbjct: 190 SATIRPLPITSGHQGQVMIGSFGLHIALHTMALLLL 225


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