BLASTX nr result

ID: Coptis25_contig00033046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033046
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306703.1| SET domain protein [Populus trichocarpa] gi|...    83   4e-14
ref|XP_003548980.1| PREDICTED: protein SET DOMAIN GROUP 41-like ...    80   3e-13
emb|CBI18219.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|XP_003595407.1| Protein SET DOMAIN GROUP [Medicago truncatul...    80   4e-13
ref|XP_002265243.2| PREDICTED: protein SET DOMAIN GROUP 41-like ...    78   1e-12

>ref|XP_002306703.1| SET domain protein [Populus trichocarpa]
           gi|222856152|gb|EEE93699.1| SET domain protein [Populus
           trichocarpa]
          Length = 626

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 57/150 (38%), Positives = 81/150 (54%)
 Frame = +3

Query: 147 ASNIEPRDSSWDHNFGTYDANHELSDCMGEIISEYLSSGNTECCCDKLENMLIRSLRNVQ 326
           ASN+     S + +F   +A  +L+D + E+ +EYL+ G+ E CC K ENMLI  L + Q
Sbjct: 293 ASNLASSSLSSELSFYRDEATRKLTDYVDEVTAEYLAVGDPESCCKKFENMLITGLLDEQ 352

Query: 327 LQLGEQSWLMAYF*VASFASPLSECLHYVSFCL*DSCE*VFSHSSGVKNQMLEAFELSRT 506
           L++ E    + +   A     L+      S     + + +FS  S V     EA  +SR 
Sbjct: 353 LEVREGKSQLNFRLHALHHLALNTYTVLASAYKIRASD-LFSLHSEVGGLPWEALSMSRI 411

Query: 507 SAAYSLLLAGAVHHFFLNESSLIVSAVHFW 596
           SAAYSLLLA A +H F  ESSL+VS  +FW
Sbjct: 412 SAAYSLLLATATYHLFCFESSLLVSVANFW 441


>ref|XP_003548980.1| PREDICTED: protein SET DOMAIN GROUP 41-like [Glycine max]
          Length = 629

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
 Frame = +3

Query: 204 ANHELSDCMGEIISEYLSSGNTECCCDKLENMLIRSLRN------------VQLQLGEQS 347
           A+  L++C+ ++I EYLS G+ E CC+KLE +L + L+               L      
Sbjct: 310 ADRRLTECIDDVILEYLSVGDPESCCEKLEEILTQGLKEHLEVIEVKPDCIFMLHPLHHH 369

Query: 348 WLMAYF*VASFASPLSECLHYVSFCL*DSCE*VFSHSSGVKNQMLEAFELSRTSAAYSLL 527
            + AY    + AS    C          +C+ + S  S      L+AF++SR SAAYSL+
Sbjct: 370 SIKAY---TTLASAYKVC----------ACD-LLSVDSETDINQLKAFDMSRISAAYSLV 415

Query: 528 LAGAVHHFFLNESSLIVSAVHFW 596
           LAGA HH F +ESSLI S  +FW
Sbjct: 416 LAGATHHLFNSESSLIASVANFW 438


>emb|CBI18219.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 16/168 (9%)
 Frame = +3

Query: 144 LASNIEPRDSSWDHNFGTYDAN-------HELSDCMGEIISEYLSSGNTECCCDKLENML 302
           L + + P   +  H+    D N        +L+D + + I++YLS GN E CC+KLEN++
Sbjct: 172 LWNKLHPESETLAHSLNYIDDNMCREEEIRKLTDYVDDAIADYLSVGNPEACCEKLENVI 231

Query: 303 IRSLRNVQLQLGEQSWLMAYF*VASFASPLSECLHYVSFCL*DSCE*VFS---------H 455
            + L + QL+  E           S A+     LH++S     +    +          H
Sbjct: 232 AQGLPDEQLEPIEGK---------SQANFKLHPLHHLSLAAYTTLASAYRVRASQLLDLH 282

Query: 456 SSGVKNQMLEAFELSRTSAAYSLLLAGAVHHFFLNESSLIVSAVHFWI 599
           S  +    LEA  L +TSAAYSLLLAGA H  FL++SSLI S  +FW+
Sbjct: 283 SE-MDGDELEALSLIKTSAAYSLLLAGATHRIFLSDSSLIASIANFWM 329


>ref|XP_003595407.1| Protein SET DOMAIN GROUP [Medicago truncatula]
           gi|355484455|gb|AES65658.1| Protein SET DOMAIN GROUP
           [Medicago truncatula]
          Length = 683

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
 Frame = +3

Query: 207 NHELSDCMGEIISEYLSSGNTECCCDKLENMLIRSLRNVQLQLGEQSWLMAYF*VASFAS 386
           +  L+D + ++ISEYLS G++  CC+KLE +LI  + + QL+    S L  +        
Sbjct: 372 DRRLTDSIEDVISEYLSVGDSVSCCEKLEKILIEGV-DEQLEGKAHSQLTLH-------- 422

Query: 387 PLSE----CLHYVSFCL*DSCE*VFSHSSGVKNQMLEAFELSRTSAAYSLLLAGAVHHFF 554
           PL      C   ++         + S  S +     +AF++SRTSAAY LLLAGA HH F
Sbjct: 423 PLHHLSLNCYMTLASAYKVRASDLLSGDSEIDFNQSKAFDMSRTSAAYFLLLAGAAHHLF 482

Query: 555 LNESSLIVSAVHFWI 599
            +ESSLI S  +FWI
Sbjct: 483 NSESSLIASVANFWI 497


>ref|XP_002265243.2| PREDICTED: protein SET DOMAIN GROUP 41-like [Vitis vinifera]
          Length = 660

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
 Frame = +3

Query: 213 ELSDCMGEIISEYLSSGNTECCCDKLENMLIRSLRNVQLQLGEQSWLMAYF*VASFASPL 392
           +L+D + + I++YLS GN E CC+KLEN++ + L + QL+  E           S A+  
Sbjct: 339 KLTDYVDDAIADYLSVGNPEACCEKLENVIAQGLPDEQLEPIEGK---------SQANFK 389

Query: 393 SECLHYVSFCL*DSCE*VFS---------HSSGVKNQMLEAFELSRTSAAYSLLLAGAVH 545
              LH++S     +    +          HS  +    LEA  L +TSAAYSLLLAGA H
Sbjct: 390 LHPLHHLSLAAYTTLASAYRVRASQLLDLHSE-MDGDELEALSLIKTSAAYSLLLAGATH 448

Query: 546 HFFLNESSLIVSAVHFWI 599
             FL++SSLI S  +FW+
Sbjct: 449 RIFLSDSSLIASIANFWM 466


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