BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032991
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...    64   2e-09
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...    63   2e-08
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...    63   3e-08
dbj|BAJ87268.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   3e-08

>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score = 63.9 bits (154), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = -1

Query: 129 ISLDGQKTGFYADQRDNRQFISSIAQGQNVLDMCC 25
           ISL+GQKTGFYADQR+NR FIS+I++GQ VLD+CC
Sbjct: 237 ISLEGQKTGFYADQRENRHFISTISEGQKVLDLCC 271



 Score = 22.7 bits (47), Expect(2) = 2e-09
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 22  CCYSGGF 2
           CCYSGGF
Sbjct: 270 CCYSGGF 276


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -1

Query: 129 ISLDGQKTGFYADQRDNRQFISSIAQGQNVLDMCCTAATVAV 4
           ISL GQKTGFYADQR+NRQFIS I+ GQ VLD+CC +   A+
Sbjct: 242 ISLKGQKTGFYADQRENRQFISRISDGQKVLDICCYSGGFAL 283


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = -1

Query: 129 ISLDGQKTGFYADQRDNRQFISSIAQGQNVLDMCCTAATVAV 4
           ISL GQKTGFYADQR+NRQFIS+I+ GQ VLD+CC +   A+
Sbjct: 185 ISLVGQKTGFYADQRENRQFISTISNGQKVLDICCYSGGFAL 226



 Score = 56.6 bits (135), Expect(2) = 1e-07
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = -3

Query: 412 YKPVIASCISRIDGINHVKWRPSIDILKEE 323
           YKP + +CI+RIDGINH+ WRPS+DILKEE
Sbjct: 126 YKPEVEACINRIDGINHINWRPSVDILKEE 155



 Score = 23.9 bits (50), Expect(2) = 1e-07
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -1

Query: 441 IASSAAWVEN 412
           IASSAAWVEN
Sbjct: 116 IASSAAWVEN 125


>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/42 (66%), Positives = 35/42 (83%)
 Frame = -1

Query: 129 ISLDGQKTGFYADQRDNRQFISSIAQGQNVLDMCCTAATVAV 4
           IS +GQKTGFYADQR+NR FIS+I++GQ VLDMCC +   A+
Sbjct: 305 ISPEGQKTGFYADQRENRHFISTISEGQRVLDMCCYSGGFAL 346


>dbj|BAJ87268.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 454

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 25/45 (55%), Positives = 37/45 (82%)
 Frame = -1

Query: 138 IIFISLDGQKTGFYADQRDNRQFISSIAQGQNVLDMCCTAATVAV 4
           +  +S++GQKTGFYADQR+NR FIS++++GQ VLD+CC +   A+
Sbjct: 249 VYLVSMEGQKTGFYADQRENRHFISTLSKGQRVLDLCCYSGGFAL 293