BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032988
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    74   6e-18
ref|XP_004144590.1| PREDICTED: uncharacterized protein LOC101204...    74   6e-18
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi...    75   1e-17
ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791...    70   2e-16
ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...    64   2e-16

>ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101225221 [Cucumis sativus]
          Length = 877

 Score = 74.3 bits (181), Expect(2) = 6e-18
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
 Frame = -1

Query: 256 SHPYENEIMELIGSNGVEFS----RFFFMVGMIWIWK*RRVMSGWIVKLVDVLSEERVFA 89
           SHPYE+EI+ L+ ++  EF+    R    +   + W         + +LVDVL++E VFA
Sbjct: 80  SHPYESEILSLLENSSPEFNFISERTDLTLSDTYAWV---ETVSQLEELVDVLNKEMVFA 136

Query: 88  VDIEHHSLRSFMWFMALLQISTQKEDYLV 2
           VD E HSLRSF+ F AL+QIST KEDYLV
Sbjct: 137 VDTEQHSLRSFLGFTALIQISTHKEDYLV 165



 Score = 41.2 bits (95), Expect(2) = 6e-18
 Identities = 20/30 (66%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
 Frame = -3

Query: 440 KPQSSFKRVLADNSYNPFKH--LNRNHGTF 357
           KPQ +FKRVLADNSY+ FKH  LN N G +
Sbjct: 45  KPQYAFKRVLADNSYSAFKHLKLNMNKGIY 74


>ref|XP_004144590.1| PREDICTED: uncharacterized protein LOC101204374 [Cucumis sativus]
          Length = 877

 Score = 74.3 bits (181), Expect(2) = 6e-18
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
 Frame = -1

Query: 256 SHPYENEIMELIGSNGVEFS----RFFFMVGMIWIWK*RRVMSGWIVKLVDVLSEERVFA 89
           SHPYE+EI+ L+ ++  EF+    R    +   + W         + +LVDVL++E VFA
Sbjct: 80  SHPYESEILSLLENSSPEFNFISERTDLTLSDTYAWV---ETVSQLEELVDVLNKEMVFA 136

Query: 88  VDIEHHSLRSFMWFMALLQISTQKEDYLV 2
           VD E HSLRSF+ F AL+QIST KEDYLV
Sbjct: 137 VDTEQHSLRSFLGFTALIQISTHKEDYLV 165



 Score = 41.2 bits (95), Expect(2) = 6e-18
 Identities = 20/30 (66%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
 Frame = -3

Query: 440 KPQSSFKRVLADNSYNPFKH--LNRNHGTF 357
           KPQ +FKRVLADNSY+ FKH  LN N G +
Sbjct: 45  KPQYAFKRVLADNSYSAFKHLKLNMNKGIY 74


>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 977

 Score = 75.1 bits (183), Expect(2) = 1e-17
 Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
 Frame = -1

Query: 262 NGSHPYENEIMELIGSNGVEFSRFFFMVGMIWIWK*RRVMSGWIV------KLVDVLSEE 101
           + SHPYE EI  LI ++G+EF    F +  I   K  +    W+       +L D LS +
Sbjct: 86  SSSHPYEREISALIENSGIEFG---FEINSIVDLKEMKDDYVWVETESQLKELTDELSNQ 142

Query: 100 RVFAVDIEHHSLRSFMWFMALLQISTQKEDYLV 2
            VFAVD E HSLRSF+ F AL+QISTQKEDYL+
Sbjct: 143 SVFAVDTEQHSLRSFLGFTALVQISTQKEDYLL 175



 Score = 39.7 bits (91), Expect(2) = 1e-17
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = -3

Query: 440 KPQSSFKRVLADNSYNPFKHLNRNHG 363
           KPQ SFKRVLADNS++ FKHL + HG
Sbjct: 49  KPQCSFKRVLADNSFSQFKHL-KLHG 73


>ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
          Length = 873

 Score = 70.5 bits (171), Expect(2) = 2e-16
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
 Frame = -1

Query: 262 NGSHPYENEIMELIGSN------GVEFSRFFFMVGMIWIWK*RRVMSGWIVKLVDVLSEE 101
           + SHPYE EI  L+ +       G E +        +W+    ++      +LVDVLSEE
Sbjct: 84  SNSHPYEAEITALLKNPLPEIELGTEIADLEMKDSYVWVHTEMQLK-----ELVDVLSEE 138

Query: 100 RVFAVDIEHHSLRSFMWFMALLQISTQKEDYLV 2
           R FAVD E HSLRSF+ F AL+QIST+++DYLV
Sbjct: 139 RFFAVDTEQHSLRSFLGFTALVQISTREKDYLV 171



 Score = 40.0 bits (92), Expect(2) = 2e-16
 Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -3

Query: 440 KPQ-SSFKRVLADNSYNPFKHLNRNHGTFCAF 348
           KPQ ++FKRV+ADNSY PFKHL  +   F  F
Sbjct: 47  KPQCAAFKRVVADNSYTPFKHLINDDAEFSCF 78


>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
           gi|355506989|gb|AES88131.1| Exosome complex exonuclease
           RRP6 [Medicago truncatula]
          Length = 974

 Score = 63.5 bits (153), Expect(2) = 2e-16
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
 Frame = -1

Query: 262 NGS--HPYENEIMELIGSNG--VEFSRFFFMVGMIWIWK*RRVMSGWIVKLVDVLSEERV 95
           NGS  HP++ EI  L+ ++   +E       +   ++W    +    + KLV+VLS+E+ 
Sbjct: 118 NGSSLHPFQAEITALLQNHQPEIELGAEKLEMNDSYVWVDTEMQ---LKKLVNVLSKEKF 174

Query: 94  FAVDIEHHSLRSFMWFMALLQISTQKEDYLV 2
           F VD E HSLRSF+ F  L+QISTQ+EDYL+
Sbjct: 175 FGVDTEQHSLRSFLGFTGLVQISTQQEDYLI 205



 Score = 46.6 bits (109), Expect(2) = 2e-16
 Identities = 25/44 (56%), Positives = 31/44 (70%), Gaps = 4/44 (9%)
 Frame = -3

Query: 440 KPQSSFKRVLADNSYNPFKHL----NRNHGTFCAFFNIFLYMFS 321
           KPQS+FKRVLADNSY PFKHL    ++N+G    FF +  + FS
Sbjct: 49  KPQSAFKRVLADNSYAPFKHLSFNASKNNGN--TFFFLLSHRFS 90