BLASTX nr result

ID: Coptis25_contig00032981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032981
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV78061.1| DMI1 [Cercis canadensis]                                56   4e-06

>gb|ADV78061.1| DMI1 [Cercis canadensis]
          Length = 596

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
 Frame = +3

Query: 9   ETF*DEGNGTTEGSLLNELAIANKSLGRGTVLAMAEQGKEEWNLT*PTPKEHVSYIECS- 185
           E F     G +EGSLLN+LAIAN+SLG GTV+ MAE+ KEE  L     K    +   S 
Sbjct: 76  EKFDSLRKGKSEGSLLNQLAIANESLGGGTVVVMAERDKEEMEL--DIAKMEFDFKGTSV 133

Query: 186 --KSGIPLILYEPKKI 227
             +SG PLIL + KK+
Sbjct: 134 ICRSGSPLILADLKKV 149


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