BLASTX nr result

ID: Coptis25_contig00032979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032979
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW67820.1| hypothetical protein ZEAMMB73_384674 [Zea mays]        221   5e-56
gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dy...   221   5e-56
ref|XP_002533199.1| dynamin, putative [Ricinus communis] gi|2235...   220   1e-55
ref|NP_001147100.1| dynamin-related protein 1C [Zea mays] gi|195...   220   1e-55
ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195...   219   1e-55

>gb|AFW67820.1| hypothetical protein ZEAMMB73_384674 [Zea mays]
          Length = 610

 Score =  221 bits (563), Expect = 5e-56
 Identities = 109/122 (89%), Positives = 117/122 (95%)
 Frame = -2

Query: 366 LDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSLSNVRKVVSEADGYQPHLIAPEQGYRR 187
           LDGGRPGGDRIY VFDNQLPAALKKLPFDRHLS+ NVRKV+SEADGYQPHLIAPEQGYRR
Sbjct: 352 LDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSMQNVRKVISEADGYQPHLIAPEQGYRR 411

Query: 186 LIDSSLSFFKGPAEASVDAVHFVLKELVRKSIAETQELKRFPSLQADIAAAAGESLEKFR 7
           LIDSSLS+FKGPAEASVDAVH VLKELVR+SIA T+ELKRFP+LQ+DIAAAA ESLE+FR
Sbjct: 412 LIDSSLSYFKGPAEASVDAVHLVLKELVRRSIAATEELKRFPTLQSDIAAAANESLERFR 471

Query: 6   ED 1
           ED
Sbjct: 472 ED 473


>gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dynamin protein 1C
           [Zea mays]
          Length = 611

 Score =  221 bits (563), Expect = 5e-56
 Identities = 109/122 (89%), Positives = 117/122 (95%)
 Frame = -2

Query: 366 LDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSLSNVRKVVSEADGYQPHLIAPEQGYRR 187
           LDGGRPGGDRIY VFDNQLPAALKKLPFDRHLS+ NVRKV+SEADGYQPHLIAPEQGYRR
Sbjct: 352 LDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSMQNVRKVISEADGYQPHLIAPEQGYRR 411

Query: 186 LIDSSLSFFKGPAEASVDAVHFVLKELVRKSIAETQELKRFPSLQADIAAAAGESLEKFR 7
           LIDSSLS+FKGPAEASVDAVH VLKELVR+SIA T+ELKRFP+LQ+DIAAAA ESLE+FR
Sbjct: 412 LIDSSLSYFKGPAEASVDAVHLVLKELVRRSIAATEELKRFPTLQSDIAAAANESLERFR 471

Query: 6   ED 1
           ED
Sbjct: 472 ED 473


>ref|XP_002533199.1| dynamin, putative [Ricinus communis] gi|223526997|gb|EEF29191.1|
           dynamin, putative [Ricinus communis]
          Length = 622

 Score =  220 bits (560), Expect = 1e-55
 Identities = 108/122 (88%), Positives = 118/122 (96%)
 Frame = -2

Query: 366 LDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSLSNVRKVVSEADGYQPHLIAPEQGYRR 187
           LDGGRPGGDRIY VFD+QLPAALKKLPFDRHLSL NV+KVVSEADGYQPHLIAPEQGYRR
Sbjct: 351 LDGGRPGGDRIYGVFDHQLPAALKKLPFDRHLSLKNVQKVVSEADGYQPHLIAPEQGYRR 410

Query: 186 LIDSSLSFFKGPAEASVDAVHFVLKELVRKSIAETQELKRFPSLQADIAAAAGESLEKFR 7
           LID S+S+FKGPAEASVDAVHFVLKELVRKSIAET+ELKRFP+LQ+DIAAAA E+LE+FR
Sbjct: 411 LIDGSISYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLQSDIAAAANEALERFR 470

Query: 6   ED 1
           +D
Sbjct: 471 DD 472


>ref|NP_001147100.1| dynamin-related protein 1C [Zea mays] gi|195607202|gb|ACG25431.1|
           dynamin-related protein 1C [Zea mays]
           gi|219884353|gb|ACL52551.1| unknown [Zea mays]
           gi|219888263|gb|ACL54506.1| unknown [Zea mays]
           gi|414872448|tpg|DAA51005.1| TPA: dynamin protein 1C
           isoform 1 [Zea mays] gi|414872449|tpg|DAA51006.1| TPA:
           dynamin protein 1C isoform 2 [Zea mays]
          Length = 611

 Score =  220 bits (560), Expect = 1e-55
 Identities = 108/122 (88%), Positives = 117/122 (95%)
 Frame = -2

Query: 366 LDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSLSNVRKVVSEADGYQPHLIAPEQGYRR 187
           LDGGRPGGDRIY VFDNQLPAALKKLPFDRHLS+ NVRKV+SEADGYQPHLIAPEQGYRR
Sbjct: 352 LDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSMQNVRKVISEADGYQPHLIAPEQGYRR 411

Query: 186 LIDSSLSFFKGPAEASVDAVHFVLKELVRKSIAETQELKRFPSLQADIAAAAGESLEKFR 7
           LIDSSLS+FKGPAEASVDAVH VLKELVR+SIA T+ELKRFP+LQ+DIAAAA +SLE+FR
Sbjct: 412 LIDSSLSYFKGPAEASVDAVHLVLKELVRRSIAATEELKRFPTLQSDIAAAANDSLERFR 471

Query: 6   ED 1
           ED
Sbjct: 472 ED 473


>ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195647378|gb|ACG43157.1|
           dynamin-related protein 1C [Zea mays]
          Length = 611

 Score =  219 bits (559), Expect = 1e-55
 Identities = 108/122 (88%), Positives = 116/122 (95%)
 Frame = -2

Query: 366 LDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSLSNVRKVVSEADGYQPHLIAPEQGYRR 187
           LDGGRPGGDRIY VFDNQLP ALKKLPFDRHLS+ NVRKV+SEADGYQPHLIAPEQGYRR
Sbjct: 352 LDGGRPGGDRIYGVFDNQLPTALKKLPFDRHLSMQNVRKVISEADGYQPHLIAPEQGYRR 411

Query: 186 LIDSSLSFFKGPAEASVDAVHFVLKELVRKSIAETQELKRFPSLQADIAAAAGESLEKFR 7
           LIDSSLS+FKGPAEASVDAVH VLKELVR+SIA T+ELKRFP+LQ+DIAAAA ESLE+FR
Sbjct: 412 LIDSSLSYFKGPAEASVDAVHLVLKELVRRSIAATEELKRFPTLQSDIAAAANESLERFR 471

Query: 6   ED 1
           ED
Sbjct: 472 ED 473


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