BLASTX nr result

ID: Coptis25_contig00032976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032976
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330517.1| predicted protein [Populus trichocarpa] gi|2...    50   2e-06

>ref|XP_002330517.1| predicted protein [Populus trichocarpa] gi|222872451|gb|EEF09582.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score = 49.7 bits (117), Expect(2) = 2e-06
 Identities = 23/70 (32%), Positives = 41/70 (58%)
 Frame = -2

Query: 494 KNKLQSMFTSERYPKIKNNNPTVQMIMVDDIINDREFWQNVKGIVVVLEPIMVLLRKVDG 315
           K +L+ MFT  ++ +  +    V   +   I+ D++FW   + IV V EP++ +LR  D 
Sbjct: 165 KKELRQMFTCMKWVESSHGKSKVGKEITAIILQDKDFWPRCEHIVKVSEPLVRVLRLADS 224

Query: 314 DDKPTMSYLH 285
           ++KP+M YL+
Sbjct: 225 EEKPSMGYLY 234



 Score = 26.6 bits (57), Expect(2) = 2e-06
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 225 VGIIKRRWNNQLGHPLHKAG 166
           + +I  RW+ QL  PLH AG
Sbjct: 259 IRVIDARWDKQLHSPLHAAG 278


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