BLASTX nr result
ID: Coptis25_contig00032976
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032976 (498 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330517.1| predicted protein [Populus trichocarpa] gi|2... 50 2e-06 >ref|XP_002330517.1| predicted protein [Populus trichocarpa] gi|222872451|gb|EEF09582.1| predicted protein [Populus trichocarpa] Length = 440 Score = 49.7 bits (117), Expect(2) = 2e-06 Identities = 23/70 (32%), Positives = 41/70 (58%) Frame = -2 Query: 494 KNKLQSMFTSERYPKIKNNNPTVQMIMVDDIINDREFWQNVKGIVVVLEPIMVLLRKVDG 315 K +L+ MFT ++ + + V + I+ D++FW + IV V EP++ +LR D Sbjct: 165 KKELRQMFTCMKWVESSHGKSKVGKEITAIILQDKDFWPRCEHIVKVSEPLVRVLRLADS 224 Query: 314 DDKPTMSYLH 285 ++KP+M YL+ Sbjct: 225 EEKPSMGYLY 234 Score = 26.6 bits (57), Expect(2) = 2e-06 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 225 VGIIKRRWNNQLGHPLHKAG 166 + +I RW+ QL PLH AG Sbjct: 259 IRVIDARWDKQLHSPLHAAG 278