BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032974
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95230.1| retrotransposon protein, putative, unclassified [...   137   9e-45
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]         132   5e-44
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi...   132   5e-44
emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]         134   9e-44
gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap...   136   2e-43

>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 936

 Score =  137 bits (344), Expect(2) = 9e-45
 Identities = 65/99 (65%), Positives = 78/99 (78%)
 Frame = -2

Query: 297  GRLIYLTNTRPDIAFAVSVVSQFMHAPRSTHMDAVDRILRYLKSSPGLGLFYPSYGPPDL 118
            GRLIYL +TRPDI +AVSVVS++MH PRS HMD V RILRYLK+SPG G+++   G  D+
Sbjct: 719  GRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDV 778

Query: 117  VSYSDADYAGCLTDRRSTSGFCTFYGGCLVSWKSKKQNV 1
              Y DAD+  CL DRRSTSG+C F GG LVSW+SKKQ+V
Sbjct: 779  EGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKQSV 817



 Score = 68.6 bits (166), Expect(2) = 9e-45
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = -3

Query: 467 RSRHGISLSQRKYTLDLLFDTGMMGCRPSRTPMDPNHRLHADIGDILPDPGPYQRLV 297
           RS  GI LSQRKY LDLL DTGM+GCRP+ TP++ NH+L A+ GD + +   YQRLV
Sbjct: 663 RSPRGIVLSQRKYVLDLLSDTGMLGCRPASTPIEQNHKLCAESGDPV-NKERYQRLV 718


>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score =  132 bits (333), Expect(2) = 5e-44
 Identities = 66/99 (66%), Positives = 76/99 (76%)
 Frame = -2

Query: 297  GRLIYLTNTRPDIAFAVSVVSQFMHAPRSTHMDAVDRILRYLKSSPGLGLFYPSYGPPDL 118
            GRLIYL +TRPDI +AVSVVS++MH PRS HMDAV RILRYLK SPG GL++   G   +
Sbjct: 780  GRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGV 839

Query: 117  VSYSDADYAGCLTDRRSTSGFCTFYGGCLVSWKSKKQNV 1
              Y DAD+A  L DRRSTSG+C F GG LVSW+SKKQ V
Sbjct: 840  EGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPV 878



 Score = 70.1 bits (170), Expect(2) = 5e-44
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = -3

Query: 467 RSRHGISLSQRKYTLDLLFDTGMMGCRPSRTPMDPNHRLHADIGDILPDPGPYQRLV 297
           RS  GI LSQRKY LDLL DTGM+GCRP+ TP++ NH+L A++GD + +   YQRLV
Sbjct: 724 RSPRGIVLSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPV-NKERYQRLV 779


>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
          Length = 806

 Score =  132 bits (333), Expect(2) = 5e-44
 Identities = 66/99 (66%), Positives = 76/99 (76%)
 Frame = -2

Query: 297 GRLIYLTNTRPDIAFAVSVVSQFMHAPRSTHMDAVDRILRYLKSSPGLGLFYPSYGPPDL 118
           GRLIYL +TRPDI +AVSVVS++MH PRS HMDAV RILRYLK SPG GL++   G   +
Sbjct: 589 GRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGV 648

Query: 117 VSYSDADYAGCLTDRRSTSGFCTFYGGCLVSWKSKKQNV 1
             Y DAD+A  L DRRSTSG+C F GG LVSW+SKKQ V
Sbjct: 649 EGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPV 687



 Score = 70.1 bits (170), Expect(2) = 5e-44
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = -3

Query: 467 RSRHGISLSQRKYTLDLLFDTGMMGCRPSRTPMDPNHRLHADIGDILPDPGPYQRLV 297
           RS  GI LSQRKY LDLL DTGM+GCRP+ TP++ NH+L A++GD + +   YQRLV
Sbjct: 533 RSPRGIVLSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPV-NKERYQRLV 588


>emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
          Length = 1262

 Score =  134 bits (336), Expect(2) = 9e-44
 Identities = 65/99 (65%), Positives = 77/99 (77%)
 Frame = -2

Query: 297  GRLIYLTNTRPDIAFAVSVVSQFMHAPRSTHMDAVDRILRYLKSSPGLGLFYPSYGPPDL 118
            GRLIYL +TRPDI +AVS+VS++MH PRS HMDAV RILRYLK SPG GL++   G  ++
Sbjct: 1045 GRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLEV 1104

Query: 117  VSYSDADYAGCLTDRRSTSGFCTFYGGCLVSWKSKKQNV 1
              Y DAD+A C  DRRSTSG+C F GG LVSW+SKKQ V
Sbjct: 1105 EGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPV 1143



 Score = 68.2 bits (165), Expect(2) = 9e-44
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = -3

Query: 467  RSRHGISLSQRKYTLDLLFDTGMMGCRPSRTPMDPNHRLHADIGDILPDPGPYQRLV 297
            RS  GI LSQRKY LDLL DTGM+GCRP+ TP+D NH+L A+ G+ + +   YQRLV
Sbjct: 989  RSPRGIVLSQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNPV-NKERYQRLV 1044


>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
          Length = 894

 Score =  136 bits (342), Expect(2) = 2e-43
 Identities = 64/99 (64%), Positives = 78/99 (78%)
 Frame = -2

Query: 297 GRLIYLTNTRPDIAFAVSVVSQFMHAPRSTHMDAVDRILRYLKSSPGLGLFYPSYGPPDL 118
           GRLIYL +TRPDI +AVSVVS++MH PRS HMD V RILRYLK+SPG G+++   G  D+
Sbjct: 677 GRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDM 736

Query: 117 VSYSDADYAGCLTDRRSTSGFCTFYGGCLVSWKSKKQNV 1
             Y DAD+  CL DRRSTSG+C F GG LVSW+SKK++V
Sbjct: 737 EGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKESV 775



 Score = 64.7 bits (156), Expect(2) = 2e-43
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -3

Query: 467 RSRHGISLSQRKYTLDLLFDTGMMGCRPSRTPMDPNHRLHADIGDILPDPGPYQRLV 297
           RS  GI LSQRKY LDLL DTGM+GCRP+ T ++ NH+L A+ GD + +   YQRLV
Sbjct: 621 RSPRGIVLSQRKYVLDLLSDTGMLGCRPASTLIEQNHKLCAESGDPV-NKERYQRLV 676