BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032963
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]              204   8e-51
emb|CBI29241.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
gb|ADE77588.1| unknown [Picea sitchensis]                             134   8e-30

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  204 bits (518), Expect = 8e-51
 Identities = 96/132 (72%), Positives = 113/132 (85%)
 Frame = -1

Query: 415 LLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADKIGELLLSSPDPNFGV 236
           LLGRAG+L EA ELV+NM+I PDSIIWGALLSACRIH +++LADKI E +++S DPN G 
Sbjct: 475 LLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGF 534

Query: 235 CILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTFLVEDTTHMGSTQI 56
           CILLSNIYAS GRWKDVAR+RR VKEK  KKPSGCSW+EVDGVVH F+VEDTTH+ S +I
Sbjct: 535 CILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEI 594

Query: 55  YETHQFLINHLK 20
           Y  ++ L+NHLK
Sbjct: 595 YGAYEILVNHLK 606


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/133 (48%), Positives = 92/133 (69%)
 Frame = -1

Query: 415 LLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADKIGELLLSSPDPNFGV 236
           LLGRAG L E+ EL+ NM I PD +IW ALL AC++HG++++  ++ E L+     + G 
Sbjct: 288 LLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGS 347

Query: 235 CILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTFLVEDTTHMGSTQI 56
            + LSNIYAS+G W+ VA++R ++KE D +K  GCSWIE+DGV+H FLVED +H  S +I
Sbjct: 348 YVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKI 407

Query: 55  YETHQFLINHLKL 17
           +   Q +  +L L
Sbjct: 408 HSMLQEMSRNLIL 420


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/133 (48%), Positives = 92/133 (69%)
 Frame = -1

Query: 415 LLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADKIGELLLSSPDPNFGV 236
           LLGRAG L E+ EL+ NM I PD +IW ALL AC++HG++++  ++ E L+     + G 
Sbjct: 405 LLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGS 464

Query: 235 CILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTFLVEDTTHMGSTQI 56
            + LSNIYAS+G W+ VA++R ++KE D +K  GCSWIE+DGV+H FLVED +H  S +I
Sbjct: 465 YVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKI 524

Query: 55  YETHQFLINHLKL 17
           +   Q +  +L L
Sbjct: 525 HSMLQEMSRNLIL 537


>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  134 bits (338), Expect = 6e-30
 Identities = 70/132 (53%), Positives = 87/132 (65%)
 Frame = -1

Query: 415 LLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADKIGELLLSSPDPNFGV 236
           LLGRAGYL EA ELVKNM I  D ++WG LL ACR+HG+I L ++I E L+S    N G 
Sbjct: 218 LLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGT 277

Query: 235 CILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTFLVEDTTHMGSTQI 56
            +LLSNIYA+ G W+ VAR+R L+KE   +K  GCS IEV+  VH FL  D  H  S +I
Sbjct: 278 YVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREI 337

Query: 55  YETHQFLINHLK 20
           YE  + +   LK
Sbjct: 338 YEMLEEINGWLK 349


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/132 (47%), Positives = 92/132 (69%)
 Frame = -1

Query: 415 LLGRAGYLNEAIELVKNMVILPDSIIWGALLSACRIHGDIDLADKIGELLLSSPDPNFGV 236
           LLGRAG+LNEA + ++ M I P + +WGA L +CRIH +I+L +++ ELLL+    N G 
Sbjct: 86  LLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGY 145

Query: 235 CILLSNIYASVGRWKDVARIRRLVKEKDTKKPSGCSWIEVDGVVHTFLVEDTTHMGSTQI 56
            +LLSNIYA+ GRW DVA++R+++KEKD KK  GCS IEV+  +H+F+V D +H  +  I
Sbjct: 146 YVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAI 205

Query: 55  YETHQFLINHLK 20
           Y   + L   ++
Sbjct: 206 YAMLETLARQME 217