BLASTX nr result

ID: Coptis25_contig00032959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032959
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002520296.1| protein binding protein, putative [Ricinus c...    75   4e-12
gb|AAC28195.1| contains similarity to Caenorhabditis elegans MEL...    75   5e-12
ref|NP_680660.2| BTB/POZ domain-containing protein [Arabidopsis ...    75   5e-12
ref|XP_002872397.1| BTB/POZ domain-containing protein [Arabidops...    74   9e-12

>ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|222856912|gb|EEE94459.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
 Frame = -2

Query: 262 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDH----RS 95
           M+CISC+E YG  +AGTCK                  +LKAKV+FL+F SP+DH    RS
Sbjct: 1   MRCISCKEYYGRCDAGTCKECYEEASETEEELKREIDDLKAKVAFLRFWSPLDHHITYRS 60

Query: 94  SS--CFTDVLLVAS--DGVVNEIGSPSVSAHKAIL 2
           S+  CFTDV+LVAS  DG+     S  V AHKA+L
Sbjct: 61  SAGPCFTDVVLVASSDDGLTGTAPSVPVPAHKAVL 95


>ref|XP_002520296.1| protein binding protein, putative [Ricinus communis]
           gi|223540515|gb|EEF42082.1| protein binding protein,
           putative [Ricinus communis]
          Length = 267

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
 Frame = -2

Query: 262 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDHRSSS-- 89
           M+CISC+EEYG  +AGTCK                  +LKAKV+FL+F SP+DH  S+  
Sbjct: 24  MRCISCKEEYGTIDAGTCKECYEEASETEEELKREIEDLKAKVAFLRFWSPLDHHHSNRS 83

Query: 88  ---CFTDVLLVAS--DGVVNEIGSP-SVSAHKAIL 2
              CFTDV+L+AS  DG     GSP  V AHKA+L
Sbjct: 84  TGPCFTDVVLIASSDDG---PTGSPVPVPAHKAVL 115


>gb|AAC28195.1| contains similarity to Caenorhabditis elegans MEL-26 (GB:U67737)
           [Arabidopsis thaliana]
          Length = 331

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDHRSSS-- 89
           M+CISCREEY  R AGTCK                  +LKAKV+FL+ SS +DH +SS  
Sbjct: 66  MRCISCREEYLPRNAGTCKECYVEAGETEEELKREIDDLKAKVAFLRLSSSLDHGTSSTS 125

Query: 88  -CFTDVLLVASDGVVNEIGSPSVSAHKAIL 2
             FTDV+L+AS+   +  GSP + AHK++L
Sbjct: 126 RSFTDVVLIASE---DNAGSPPIPAHKSVL 152


>ref|NP_680660.2| BTB/POZ domain-containing protein [Arabidopsis thaliana]
           gi|75254656|sp|Q6DBN1.1|Y4845_ARATH RecName:
           Full=BTB/POZ domain-containing protein At4g08455
           gi|50198819|gb|AAT70442.1| At4g08455 [Arabidopsis
           thaliana] gi|56381961|gb|AAV85699.1| At4g08455
           [Arabidopsis thaliana] gi|332657244|gb|AEE82644.1|
           BTB/POZ domain-containing protein [Arabidopsis thaliana]
          Length = 243

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDHRSSS-- 89
           M+CISCREEY  R AGTCK                  +LKAKV+FL+ SS +DH +SS  
Sbjct: 1   MRCISCREEYLPRNAGTCKECYVEAGETEEELKREIDDLKAKVAFLRLSSSLDHGTSSTS 60

Query: 88  -CFTDVLLVASDGVVNEIGSPSVSAHKAIL 2
             FTDV+L+AS+   +  GSP + AHK++L
Sbjct: 61  RSFTDVVLIASE---DNAGSPPIPAHKSVL 87


>ref|XP_002872397.1| BTB/POZ domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318234|gb|EFH48656.1| BTB/POZ
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 243

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDHRSSS-- 89
           M+CISCREEY  R AGTCK                  +LKAKVSFL+ SS +DH +SS  
Sbjct: 1   MRCISCREEYLPRNAGTCKECYVEAGETEEELKREIDDLKAKVSFLRLSSSLDHGTSSSS 60

Query: 88  -CFTDVLLVASDGVVNEIGSPSVSAHKAIL 2
             FTD++L+AS    +  GSP + AHK++L
Sbjct: 61  RSFTDLVLIASQ---DSAGSPPIPAHKSVL 87


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