BLASTX nr result

ID: Coptis25_contig00032948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032948
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254...    62   6e-08
ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245...    62   6e-08
emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]    62   6e-08
emb|CAN63568.1| hypothetical protein VITISV_043429 [Vitis vinifera]    61   8e-08

>ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254594 [Vitis vinifera]
          Length = 954

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
 Frame = -3

Query: 508  DIRSNDKENTNTSSASKLISDQVVSGCRVSDLKQGIPIDGSEPTIVLMACHNDNNSSKPD 329
            +++S   E+  T + S L S +V  G    D +     +     + L    N  NS+   
Sbjct: 605  ELKSLPVESLETINNSNLTSSRVTGGDSSEDSQD----ESDSADMSLNGQKNTTNSNHAK 660

Query: 328  KNPDKIMKVQSIRINGPKQPNVPMDSPKDGDTSMPG-----RNPGMIKCQFSRRRKHGQS 164
                     Q +  N P      +++ +D +T+        RN   IK QFSRR K G S
Sbjct: 661  AISHSSSLTQRVSTNSPDAAKKLVENNQDQNTNTSDDKHLRRN---IKHQFSRRTKSGHS 717

Query: 163  NSIAPVTKRRRLTACSREDATHSEKAICVDHKMREKELLCQMGSSD 26
            N +AP+ KRRRLTAC++ + + +E ++ V    ++++  C +GSS+
Sbjct: 718  NYLAPLIKRRRLTACAKAETSRAE-SLSVGPLSKQEKSHCMLGSSE 762


>ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245979 [Vitis vinifera]
          Length = 894

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
 Frame = -3

Query: 508  DIRSNDKENTNTSSASKLISDQVVSGCRVSDLKQGIPIDGSEPTIVLMACHNDNNSSKPD 329
            ++RS   E++NTS++S    +         D  + + +D S     +     + N S P 
Sbjct: 515  EVRSLPFESSNTSTSSSHFEEND------EDTSEELVVDESNSGYNMFLNQEETNYSNPT 568

Query: 328  K-----------NPDKIMKV-QSIRINGPKQPNVPMDSPKDGDTSMPG--RNPGMIKCQF 191
            K              +I  V Q I  N P   ++P   PK  +T+M    +     KC  
Sbjct: 569  KIIFEGRVCSGSKDSEISAVNQGIPTNDPDSTSLPAKVPKSQNTNMYNAKKQSRAPKCHL 628

Query: 190  SRRRKHGQSNSIAPVTK-RRRLTACSREDATHSEKAICVDHKMREKELLCQMGSSDGD 20
             R+ K   SN +APVTK RRRLTACSR + + S     V  +++++E    +G  D D
Sbjct: 629  GRKMKPDMSNYLAPVTKRRRRLTACSRAETSQSTITFLVGPELKQEESGGCIGKHDSD 686


>emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]
          Length = 958

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
 Frame = -3

Query: 508  DIRSNDKENTNTSSASKLISDQVVSGCRVSDLKQGIPIDGSEPTIVLMACHNDNNSSKPD 329
            +++S   E+  T + S L S +V  G    D +     +     + L    N  NS+   
Sbjct: 586  ELKSLPVESLETINNSNLTSSRVTGGDSSEDSQD----ESDSADMSLNGQKNTTNSNHAK 641

Query: 328  KNPDKIMKVQSIRINGPKQPNVPMDSPKDGDTSMPG-----RNPGMIKCQFSRRRKHGQS 164
                     Q +  N P      +++ +D +T+        RN   IK QFSRR K G S
Sbjct: 642  AISHSSSLTQRVSTNSPDAAKKLVENNQDQNTNTSDDKHLRRN---IKHQFSRRTKSGHS 698

Query: 163  NSIAPVTKRRRLTACSREDATHSEKAICVDHKMREKELLCQMGSSD 26
            N +AP+ KRRRLTAC++ + + +E ++ V    ++++  C +GSS+
Sbjct: 699  NYLAPLIKRRRLTACAKAETSRAE-SLSVGPLSKQEKSHCMLGSSE 743


>emb|CAN63568.1| hypothetical protein VITISV_043429 [Vitis vinifera]
          Length = 885

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
 Frame = -3

Query: 508  DIRSNDKENTNTSSASKLISDQVVSGCRVSDLKQGIPIDGSEPTIVLMACHNDNNSSKPD 329
            ++RS   E++NTS++S    +         D  + + +D S     +     + N S P 
Sbjct: 560  EVRSLPFESSNTSTSSSHFEEND------EDTSEELVVDESNSGYNMFLNQEETNYSNPT 613

Query: 328  K-----------NPDKIMKV-QSIRINGPKQPNVPMDSPKDGDTSMPG--RNPGMIKCQF 191
            K              +I  V Q I  N P   ++P   PK  +T+M    +     KC  
Sbjct: 614  KIIFEGRVCSGSKDSEISAVNQGIPTNDPDSTSLPAKVPKSQNTNMYNAKKQSRAPKCXL 673

Query: 190  SRRRKHGQSNSIAPVTK-RRRLTACSREDATHSEKAICVDHKMREKELLCQMGSSDGD 20
             R+ K   SN +APVTK RRRLTACSR + + S     V  +++++E    +G  D D
Sbjct: 674  GRKMKPDMSNYLAPVTKRRRRLTACSRAETSQSTITFLVGPELKQEESGGCIGKHDSD 731


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