BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032945
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   271   8e-71
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   271   8e-71
ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solan...   267   1e-69
ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c...   265   4e-69
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         264   1e-68

>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  271 bits (693), Expect = 8e-71
 Identities = 134/175 (76%), Positives = 149/175 (85%)
 Frame = -1

Query: 656 AQEVPVDEIGSXXXXXXXXXXXMVLRKAPGVGLAAPQIGIPLKIIVLEDTKEYISYAPKE 477
           A+EV   EIGS           + +RKAPGVGLAAPQIGIPL+IIVLEDTKEYISYAPKE
Sbjct: 93  AREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKE 152

Query: 476 ENEARDRRPFELLVILNPKLKKKNDKTALFFEGCLSVDGFRAVVERHLDVEVTGFGRDGS 297
           E +A+DRR F+LLVI+NPKLK K++KTALFFEGCLSVDGFRAVVER+LDVEV GF RDG+
Sbjct: 153 EIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGN 212

Query: 296 PIRVDASGWQARILQHECDHLDGTIYVDKLVPRTFRTVENLNLPLPNGCHKLGVR 132
           PI+VDASGWQARILQHECDHLDGT+YVDK+VPRTFRT ENL LPL  GC KLG R
Sbjct: 213 PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  271 bits (693), Expect = 8e-71
 Identities = 135/175 (77%), Positives = 150/175 (85%)
 Frame = -1

Query: 656 AQEVPVDEIGSXXXXXXXXXXXMVLRKAPGVGLAAPQIGIPLKIIVLEDTKEYISYAPKE 477
           A+EV   EIGS           + +RKAPGVGLAAPQIGIPL+IIVLEDTKEYISYAPKE
Sbjct: 93  AREVDPKEIGSEKVXKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKE 152

Query: 476 ENEARDRRPFELLVILNPKLKKKNDKTALFFEGCLSVDGFRAVVERHLDVEVTGFGRDGS 297
           E +A+DRR F+LLVI+NPKLK K++KTALFFEGCLSVDGFRAVVER+LDVEV GF RDG+
Sbjct: 153 EIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGN 212

Query: 296 PIRVDASGWQARILQHECDHLDGTIYVDKLVPRTFRTVENLNLPLPNGCHKLGVR 132
           PI+VDASGWQARILQHECDHLDGT+YVDK+VPRTFRT ENL LPL  GC KLG R
Sbjct: 213 PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


>ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
           gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName:
           Full=Peptide deformylase 1A, chloroplastic; Short=PDF
           1A; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320968|gb|AAG33981.1|AF271258_1 peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 277

 Score =  267 bits (683), Expect = 1e-69
 Identities = 131/174 (75%), Positives = 148/174 (85%)
 Frame = -1

Query: 656 AQEVPVDEIGSXXXXXXXXXXXMVLRKAPGVGLAAPQIGIPLKIIVLEDTKEYISYAPKE 477
           +Q++P++EIGS            V+R APGVGLAAPQIGIPLKIIVLEDT EYISYAPK+
Sbjct: 103 SQDIPLEEIGSERIQKIIEEMVKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKD 162

Query: 476 ENEARDRRPFELLVILNPKLKKKNDKTALFFEGCLSVDGFRAVVERHLDVEVTGFGRDGS 297
           E +A+DRRPF LLVI+NPKLKKK +KTALFFEGCLSVDGFRAVVERHL+VEVTG  R+G 
Sbjct: 163 ETKAQDRRPFGLLVIINPKLKKKGNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGK 222

Query: 296 PIRVDASGWQARILQHECDHLDGTIYVDKLVPRTFRTVENLNLPLPNGCHKLGV 135
            I+VDASGWQARILQHE DHLDGT+YVDK+ PRTFRTVENL+LPL  GC KLGV
Sbjct: 223 AIKVDASGWQARILQHEYDHLDGTLYVDKMAPRTFRTVENLDLPLAAGCPKLGV 276


>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223543236|gb|EEF44768.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 266

 Score =  265 bits (678), Expect = 4e-69
 Identities = 129/175 (73%), Positives = 147/175 (84%)
 Frame = -1

Query: 656 AQEVPVDEIGSXXXXXXXXXXXMVLRKAPGVGLAAPQIGIPLKIIVLEDTKEYISYAPKE 477
           A+EV  DEIGS            V+R+APGVGLAAPQIG+PL+IIVLEDT EYI YAPKE
Sbjct: 92  AREVDPDEIGSERIQKIIDDMVKVMRRAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKE 151

Query: 476 ENEARDRRPFELLVILNPKLKKKNDKTALFFEGCLSVDGFRAVVERHLDVEVTGFGRDGS 297
           E +A+DRRPF+LLVILNPKLKKK ++TALFFEGCLSVDGFRAVVER L+VEV+G  R G 
Sbjct: 152 ETKAQDRRPFDLLVILNPKLKKKGNRTALFFEGCLSVDGFRAVVERSLEVEVSGLDRSGQ 211

Query: 296 PIRVDASGWQARILQHECDHLDGTIYVDKLVPRTFRTVENLNLPLPNGCHKLGVR 132
           PI+VDASGWQARILQHECDHLDGT+YVDK+VPRTFRTV+NL+LPL  GC  LG +
Sbjct: 212 PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTVDNLDLPLAEGCPNLGAQ 266


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  264 bits (675), Expect = 1e-68
 Identities = 128/175 (73%), Positives = 147/175 (84%)
 Frame = -1

Query: 656 AQEVPVDEIGSXXXXXXXXXXXMVLRKAPGVGLAAPQIGIPLKIIVLEDTKEYISYAPKE 477
           A+EV  +EIGS             +R APGVGLAAPQIG+PL+IIVLEDTKEYI YAPKE
Sbjct: 100 AREVDPEEIGSERIQKIIDDMIKAMRMAPGVGLAAPQIGVPLRIIVLEDTKEYIRYAPKE 159

Query: 476 ENEARDRRPFELLVILNPKLKKKNDKTALFFEGCLSVDGFRAVVERHLDVEVTGFGRDGS 297
           E +A+DRRPF+LLVILNPKL+KK+++TA FFEGCLSVDGFRAVVER+LDVEVTG  R G 
Sbjct: 160 ETKAQDRRPFDLLVILNPKLEKKSNRTAFFFEGCLSVDGFRAVVERYLDVEVTGLSRYGQ 219

Query: 296 PIRVDASGWQARILQHECDHLDGTIYVDKLVPRTFRTVENLNLPLPNGCHKLGVR 132
           PI+V+ASGWQARILQHECDHLDGT+YVDK+VPRTFRT+ENL+LPL  GC  LG R
Sbjct: 220 PIKVNASGWQARILQHECDHLDGTLYVDKMVPRTFRTIENLDLPLAEGCPNLGAR 274