BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032910
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   190   1e-46
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   190   1e-46
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   183   1e-44
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   181   5e-44
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   180   9e-44

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  190 bits (482), Expect = 1e-46
 Identities = 106/174 (60%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3    MIFDEIHLLYDRRGAVLEAIVARTVKRNETLKERIRLVRLSALLPKRDCEYLASFL*VCP 182
            +I DEIHLL+D RG VLE+IVARTV++ ET KE IRLV LSA LP  + E +A FL V  
Sbjct: 643  LIVDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLP--NYEDVALFLRVDL 700

Query: 183  SVGLFYFDNRYKPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQVLVFVHSNG 362
              GLF+FDN Y+PC LAQQYIG+   KP +RFQLM++ CY KV AVAG+HQVL+FVHS  
Sbjct: 701  KKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQVLIFVHSRK 760

Query: 363  ETVRTARDI*DTARANNKLGCFLK--AASTSLLHSHAKSVKTDGLGALLSHGFA 518
            ET +TAR I DTA AN+ LG FLK  +AS  +LHSH + VK + L  LL +GFA
Sbjct: 761  ETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVKNNDLKDLLPYGFA 814


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  190 bits (482), Expect = 1e-46
 Identities = 106/174 (60%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3    MIFDEIHLLYDRRGAVLEAIVARTVKRNETLKERIRLVRLSALLPKRDCEYLASFL*VCP 182
            +I DEIHLL+D RG VLE+IVARTV++ ET KE IRLV LSA LP  + E +A FL V  
Sbjct: 610  LIVDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLP--NYEDVALFLRVDL 667

Query: 183  SVGLFYFDNRYKPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQVLVFVHSNG 362
              GLF+FDN Y+PC LAQQYIG+   KP +RFQLM++ CY KV AVAG+HQVL+FVHS  
Sbjct: 668  KKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQVLIFVHSRK 727

Query: 363  ETVRTARDI*DTARANNKLGCFLK--AASTSLLHSHAKSVKTDGLGALLSHGFA 518
            ET +TAR I DTA AN+ LG FLK  +AS  +LHSH + VK + L  LL +GFA
Sbjct: 728  ETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVKNNDLKDLLPYGFA 781


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  183 bits (464), Expect = 1e-44
 Identities = 102/174 (58%), Positives = 127/174 (72%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3    MIFDEIHLLYDRRGAVLEAIVARTVKRNETLKERIRLVRLSALLPKRDCEYLASFL*VCP 182
            +I DEIHLL+D RG VLE+IVARTV++ ET K+ IRLV LSA LP  + E +A FL V  
Sbjct: 648  LIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLSATLP--NYEDVALFLRVDL 705

Query: 183  SVGLFYFDNRYKPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQVLVFVHSNG 362
              GLFYFDN Y+P  L+QQY+G+   KP +RFQLM++ CY KV AVAG+HQVL+FVHS  
Sbjct: 706  KKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRK 765

Query: 363  ETVRTARDI*DTARANNKLGCFLK--AASTSLLHSHAKSVKTDGLGALLSHGFA 518
            ET +TAR I DTA AN+ LG FLK  +AS  +LH+H   VK++ L  LL +GFA
Sbjct: 766  ETAKTARAIRDTALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFA 819


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  181 bits (459), Expect = 5e-44
 Identities = 101/174 (58%), Positives = 126/174 (72%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3    MIFDEIHLLYDRRGAVLEAIVARTVKRNETLKERIRLVRLSALLPKRDCEYLASFL*VCP 182
            +I DEIHLL+D RG VLE+IVARTV++ ET K+ IRLV LSA LP  + E +A FL V  
Sbjct: 648  LIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLSATLP--NYEDVALFLRVDL 705

Query: 183  SVGLFYFDNRYKPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQVLVFVHSNG 362
              GLFYFDN Y+P  L+QQY+G+   KP +RFQLM++ CY KV AVAG+HQVL+FVHS  
Sbjct: 706  KKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRK 765

Query: 363  ETVRTARDI*DTARANNKLGCFLK--AASTSLLHSHAKSVKTDGLGALLSHGFA 518
            ET +TAR I D A AN+ LG FLK  +AS  +LH+H   VK++ L  LL +GFA
Sbjct: 766  ETAKTARAIRDAALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFA 819


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
           putative [Ricinus communis]
          Length = 1809

 Score =  180 bits (457), Expect = 9e-44
 Identities = 102/174 (58%), Positives = 126/174 (72%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3   MIFDEIHLLYDRRGAVLEAIVARTVKRNETLKERIRLVRLSALLPKRDCEYLASFL*VCP 182
           +I DEIHLL+D RG VLE+IVARTV++ ET KE IRLV LSA LP  + E +A FL V  
Sbjct: 276 LIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLP--NYEDVALFLRVDL 333

Query: 183 SVGLFYFDNRYKPCQLAQQYIGMASLKPFERFQLMDEQCYVKVAAVAGEHQVLVFVHSNG 362
             GLF+FDN Y+P  L+QQYIG+   KP +RFQLM++ CY KV AVAG+HQVL+FVHS  
Sbjct: 334 KKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRK 393

Query: 363 ETVRTARDI*DTARANNKLGCFLK--AASTSLLHSHAKSVKTDGLGALLSHGFA 518
           ET +TAR I D+A AN+ LG FLK  +AS  +L SH   VK++ L  LL +GFA
Sbjct: 394 ETAKTARAIRDSALANDTLGRFLKEDSASREILQSHTDMVKSNDLKDLLPYGFA 447