BLASTX nr result

ID: Coptis25_contig00032892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032892
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550792.1| PREDICTED: formin-like protein 20-like [Glyc...    64   2e-08
ref|XP_002281720.2| PREDICTED: formin-like protein 6-like [Vitis...    63   2e-08
emb|CBI15184.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002514716.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
ref|XP_002330103.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_003550792.1| PREDICTED: formin-like protein 20-like [Glycine max]
          Length = 1421

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = -1

Query: 393 RKQYSWEQTILEMVYKQAPRELLHLLSPLNPQPANI 286
           RKQYS +Q  LEMVYKQAPRELLHLLSPLNPQP+++
Sbjct: 146 RKQYSGDQKTLEMVYKQAPRELLHLLSPLNPQPSHL 181


>ref|XP_002281720.2| PREDICTED: formin-like protein 6-like [Vitis vinifera]
          Length = 1498

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -1

Query: 393 RKQYSWEQTILEMVYKQAPRELLHLLSPLNPQPANI 286
           RKQY+ EQ  LEMVYKQAPRELLHLLSPLNPQP+ +
Sbjct: 146 RKQYNGEQRTLEMVYKQAPRELLHLLSPLNPQPSQL 181


>emb|CBI15184.3| unnamed protein product [Vitis vinifera]
          Length = 1010

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -1

Query: 393 RKQYSWEQTILEMVYKQAPRELLHLLSPLNPQPANI 286
           RKQY+ EQ  LEMVYKQAPRELLHLLSPLNPQP+ +
Sbjct: 146 RKQYNGEQRTLEMVYKQAPRELLHLLSPLNPQPSQL 181


>ref|XP_002514716.1| conserved hypothetical protein [Ricinus communis]
           gi|223546320|gb|EEF47822.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1550

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -1

Query: 393 RKQYSWEQTILEMVYKQAPRELLHLLSPLNPQPANI 286
           RKQY+ EQ  LEMVYKQAP+ELLHLLSPLNPQP+ +
Sbjct: 146 RKQYTGEQKTLEMVYKQAPKELLHLLSPLNPQPSQL 181


>ref|XP_002330103.1| predicted protein [Populus trichocarpa] gi|222871237|gb|EEF08368.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 393 RKQYSWEQTILEMVYKQAPRELLHLLSPLNPQPANI 286
           RKQY+ E   LEMVYKQAPRELLHLLSPLNPQP+ +
Sbjct: 86  RKQYTGENKTLEMVYKQAPRELLHLLSPLNPQPSQL 121


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