BLASTX nr result

ID: Coptis25_contig00032880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032880
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29334.3| unnamed protein product [Vitis vinifera]              247   1e-63
ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-conta...   247   1e-63
ref|XP_002888848.1| ABC1 family protein [Arabidopsis lyrata subs...   233   1e-59
gb|AAF43234.1|AC012654_18 EST gb|AI998820 comes from this gene [...   230   1e-58
ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58

>emb|CBI29334.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  247 bits (630), Expect = 1e-63
 Identities = 124/179 (69%), Positives = 156/179 (87%)
 Frame = -2

Query: 537 EVHTFTKYSGYVFENQSNSEADALLEYNVSKISAIYKKRPXXXXXXXLQISTSLGRWFFL 358
           +V TFT+YSGY+F N S+SEAD+L EY+VS+I AIY+ RP        QI+T+LG+W  L
Sbjct: 52  DVDTFTQYSGYLF-NLSSSEADSLTEYDVSRIGAIYRNRPLVLIRRLFQIATTLGKWLGL 110

Query: 357 RYIDSLMQKSDQLFKVRAAELRKILVELGPAFVKVAQAVSSRPDLIPPAYVNELSLLQDQ 178
           RYID LM++SDQ+F+VRAAELRKILVELGPA++K+AQA+SSRPDLIPP+Y+++LSLLQD+
Sbjct: 111 RYIDGLMERSDQMFEVRAAELRKILVELGPAYIKIAQAISSRPDLIPPSYLDQLSLLQDR 170

Query: 177 ITPFSSQVAFSTIEEELGVALEMLFSKISPEPVAAASLGQVYQARLRDSAKVVAVKVQR 1
           ITPFS++VAF+TIE ELG+ ++ LFS+ISPEPVAAASLGQVYQARL  S +VVAVKVQR
Sbjct: 171 ITPFSNEVAFNTIERELGLPIDKLFSEISPEPVAAASLGQVYQARLCPSGQVVAVKVQR 229


>ref|XP_002264943.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           At1g71810, chloroplastic-like [Vitis vinifera]
          Length = 713

 Score =  247 bits (630), Expect = 1e-63
 Identities = 124/179 (69%), Positives = 156/179 (87%)
 Frame = -2

Query: 537 EVHTFTKYSGYVFENQSNSEADALLEYNVSKISAIYKKRPXXXXXXXLQISTSLGRWFFL 358
           +V TFT+YSGY+F N S+SEAD+L EY+VS+I AIY+ RP        QI+T+LG+W  L
Sbjct: 52  DVDTFTQYSGYLF-NLSSSEADSLTEYDVSRIGAIYRNRPLVLIRRLFQIATTLGKWLGL 110

Query: 357 RYIDSLMQKSDQLFKVRAAELRKILVELGPAFVKVAQAVSSRPDLIPPAYVNELSLLQDQ 178
           RYID LM++SDQ+F+VRAAELRKILVELGPA++K+AQA+SSRPDLIPP+Y+++LSLLQD+
Sbjct: 111 RYIDGLMERSDQMFEVRAAELRKILVELGPAYIKIAQAISSRPDLIPPSYLDQLSLLQDR 170

Query: 177 ITPFSSQVAFSTIEEELGVALEMLFSKISPEPVAAASLGQVYQARLRDSAKVVAVKVQR 1
           ITPFS++VAF+TIE ELG+ ++ LFS+ISPEPVAAASLGQVYQARL  S +VVAVKVQR
Sbjct: 171 ITPFSNEVAFNTIERELGLPIDKLFSEISPEPVAAASLGQVYQARLCPSGQVVAVKVQR 229


>ref|XP_002888848.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334689|gb|EFH65107.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 692

 Score =  233 bits (595), Expect = 1e-59
 Identities = 120/186 (64%), Positives = 150/186 (80%)
 Frame = -2

Query: 558 ISAIKAREVHTFTKYSGYVFENQSNSEADALLEYNVSKISAIYKKRPXXXXXXXLQISTS 379
           +++  +R+V +FT  SGY+F + S  EAD+L EYN  +I  +YKK+P        QI T+
Sbjct: 37  VASAASRDVDSFTSKSGYLF-SLSADEADSLSEYNFPRIDGMYKKKPLILLRRLAQIGTT 95

Query: 378 LGRWFFLRYIDSLMQKSDQLFKVRAAELRKILVELGPAFVKVAQAVSSRPDLIPPAYVNE 199
            G WF LR  D  +++S+Q+FKVRAAELRK+LVELGPA+VK+AQAVSSRPDLIPP Y++E
Sbjct: 96  FGYWFGLRLADEALERSEQMFKVRAAELRKLLVELGPAYVKIAQAVSSRPDLIPPIYLDE 155

Query: 198 LSLLQDQITPFSSQVAFSTIEEELGVALEMLFSKISPEPVAAASLGQVYQARLRDSAKVV 19
           LSLLQDQITPFSS+VAF+ IE+ELG+ ++ LFS+ISPEPVAAASLGQVYQARLR S KVV
Sbjct: 156 LSLLQDQITPFSSEVAFNMIEDELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVV 215

Query: 18  AVKVQR 1
           AVKVQR
Sbjct: 216 AVKVQR 221


>gb|AAF43234.1|AC012654_18 EST gb|AI998820 comes from this gene [Arabidopsis thaliana]
          Length = 649

 Score =  230 bits (587), Expect = 1e-58
 Identities = 119/181 (65%), Positives = 146/181 (80%)
 Frame = -2

Query: 543 AREVHTFTKYSGYVFENQSNSEADALLEYNVSKISAIYKKRPXXXXXXXLQISTSLGRWF 364
           +R+V +FT  SGY+F + S  EAD+L EYN  +I  +YKK+P        QI T+   WF
Sbjct: 42  SRDVDSFTSKSGYLF-SLSADEADSLSEYNFPRIDGMYKKKPLILLRRLAQIGTTFSYWF 100

Query: 363 FLRYIDSLMQKSDQLFKVRAAELRKILVELGPAFVKVAQAVSSRPDLIPPAYVNELSLLQ 184
            LR  D  +++SDQ+FKVRAAELRK+LVELGPA+VK+AQAVSSRPDLIPP Y++ELSLLQ
Sbjct: 101 GLRLADEALERSDQMFKVRAAELRKLLVELGPAYVKIAQAVSSRPDLIPPIYLDELSLLQ 160

Query: 183 DQITPFSSQVAFSTIEEELGVALEMLFSKISPEPVAAASLGQVYQARLRDSAKVVAVKVQ 4
           DQITPFS++VAF+ IE+ELG+ ++ LFS+ISPEPVAAASLGQVYQARLR S KVVAVKVQ
Sbjct: 161 DQITPFSTEVAFNMIEDELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVVAVKVQ 220

Query: 3   R 1
           R
Sbjct: 221 R 221


>ref|XP_002300887.1| predicted protein [Populus trichocarpa] gi|222842613|gb|EEE80160.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  230 bits (587), Expect = 1e-58
 Identities = 113/187 (60%), Positives = 153/187 (81%)
 Frame = -2

Query: 561 TISAIKAREVHTFTKYSGYVFENQSNSEADALLEYNVSKISAIYKKRPXXXXXXXLQIST 382
           T+  +   +V  FT+ SGY+F+  S+SE D+L +Y++ KI+AIYK++P        QI +
Sbjct: 36  TLRVVNNNDVDAFTEKSGYLFK-LSSSEVDSLNDYDLKKIAAIYKRKPLILLRRLFQIGS 94

Query: 381 SLGRWFFLRYIDSLMQKSDQLFKVRAAELRKILVELGPAFVKVAQAVSSRPDLIPPAYVN 202
           + GRW   RYIDS+ +KSD +FK+RAAELR+IL+ELGPA++K+AQAVSSRPDLIPP+Y++
Sbjct: 95  TFGRWLAARYIDSITEKSDLMFKIRAAELRQILLELGPAYIKIAQAVSSRPDLIPPSYLD 154

Query: 201 ELSLLQDQITPFSSQVAFSTIEEELGVALEMLFSKISPEPVAAASLGQVYQARLRDSAKV 22
           ELSLLQD+I PFS++VA +TIE+ELG+ ++M+FS+ISPEP AAASLGQVYQARLR + +V
Sbjct: 155 ELSLLQDRIAPFSTEVALNTIEQELGLPIDMIFSEISPEPTAAASLGQVYQARLRSNGQV 214

Query: 21  VAVKVQR 1
           VAVKVQR
Sbjct: 215 VAVKVQR 221


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