BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032877
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   247   6e-64
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              247   6e-64
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   185   3e-45
gb|ABK26521.1| unknown [Picea sitchensis]                             173   1e-41
gb|ADE77588.1| unknown [Picea sitchensis]                             171   7e-41

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  247 bits (631), Expect = 6e-64
 Identities = 115/161 (71%), Positives = 138/161 (85%)
 Frame = -3

Query: 484 PIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLSNVYASLNRWSDVE 305
           P+ PN+ V GSLLR+CQ+HKDTKL EQVT+ +L+LDP DGGNYVFLSN+YASL+RW DV 
Sbjct: 369 PMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVN 428

Query: 304 TCRELLAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLEELAKKLSGIGHKP 125
           TCR+L+ +RG+ KT GCSSIEV N+VHEFVAGDTSHPQF QIN FL+E+AK+L G GH P
Sbjct: 429 TCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVP 488

Query: 124 DMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIR 2
           +   VLHDI EEEKE ++R+HSE+IAVAFGLMSTP GK+IR
Sbjct: 489 NTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIR 529


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  247 bits (631), Expect = 6e-64
 Identities = 115/161 (71%), Positives = 138/161 (85%)
 Frame = -3

Query: 484 PIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLSNVYASLNRWSDVE 305
           P+ PN+ V GSLLR+CQ+HKDTKL EQVT+ +L+LDP DGGNYVFLSN+YASL+RW DV 
Sbjct: 297 PMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVN 356

Query: 304 TCRELLAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLEELAKKLSGIGHKP 125
           TCR+L+ +RG+ KT GCSSIEV N+VHEFVAGDTSHPQF QIN FL+E+AK+L G GH P
Sbjct: 357 TCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVP 416

Query: 124 DMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIR 2
           +   VLHDI EEEKE ++R+HSE+IAVAFGLMSTP GK+IR
Sbjct: 417 NTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIR 457


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/161 (52%), Positives = 118/161 (73%)
 Frame = -3

Query: 484 PIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLSNVYASLNRWSDVE 305
           P  PN+A+WG+LL +C++H DT+L EQV + +L+LDP  GG YV LSN+YA+  RW  V 
Sbjct: 432 PFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVA 491

Query: 304 TCRELLAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLEELAKKLSGIGHKP 125
             R ++ ER +SKT GCS I++G+ +HEFVAGD+SHPQ   I   L E++++L   G+KP
Sbjct: 492 ELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKP 551

Query: 124 DMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIR 2
           D   VL D++EEEKET++ HHSEK+A+AFGL+ T  G +IR
Sbjct: 552 DTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIR 592


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  173 bits (438), Expect = 1e-41
 Identities = 77/161 (47%), Positives = 112/161 (69%)
 Frame = -3

Query: 484 PIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLSNVYASLNRWSDVE 305
           P+ PNA+VWGSLL +C++H + +L+E+  E +++L P + G YV LSN+YA+  RW D  
Sbjct: 162 PVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAG 221

Query: 304 TCRELLAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLEELAKKLSGIGHKP 125
             R+++ +R + K  GCS IEV N VH F+ GD+SHPQ  +I   LE L  ++   G+ P
Sbjct: 222 KVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIP 281

Query: 124 DMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIR 2
           +  FVLHD+ EE+KE  + HHSEK+A+AFG++STP G +IR
Sbjct: 282 NTNFVLHDVEEEQKEWILGHHSEKLAIAFGIISTPPGTTIR 322


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/161 (50%), Positives = 109/161 (67%)
 Frame = -3

Query: 484 PIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLSNVYASLNRWSDVE 305
           PI P A+VWG+ L SC++H + +L E+V E +L LDP + G YV LSN+YA+  RW DV 
Sbjct: 104 PIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVA 163

Query: 304 TCRELLAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLEELAKKLSGIGHKP 125
             R+++ E+ + K+ GCS IEV N +H FV GD SHPQ   I   LE LA+++  +G+ P
Sbjct: 164 KVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQMEAVGYVP 223

Query: 124 DMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIR 2
              FVLHD+ EE KE  +  HSEK+A+AFGL+ST  G SIR
Sbjct: 224 CTDFVLHDVEEEIKENMLFAHSEKLAIAFGLISTRSGTSIR 264