BLASTX nr result

ID: Coptis25_contig00032868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032868
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246...    90   2e-16
emb|CBI24251.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus comm...    79   5e-13

>ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246624 [Vitis vinifera]
          Length = 884

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/102 (50%), Positives = 60/102 (58%)
 Frame = +1

Query: 31  VSGMDSHSALVANEPHQSMGDILTSMDTGLPLQVASHEVHVEKPTSKLNGSNNSAKRSNF 210
           ++ MDS S L A E  +SMG+IL SMD GLPL V+  E   EK   KL  SN + KRS F
Sbjct: 497 INEMDSPSILPAVESQRSMGEILASMDPGLPLPVSGLESSAEKAVGKLTSSNPNGKRSTF 556

Query: 211 LGRSKGRRNPXXXXXXXXXXXXFAIQRLELAKNDLLNRIAKE 336
            GRS  R+ P             AIQRLE+ KNDL +RIAKE
Sbjct: 557 WGRSTARKTPSTESVDSSGEEELAIQRLEITKNDLRHRIAKE 598


>emb|CBI24251.3| unnamed protein product [Vitis vinifera]
          Length = 886

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/102 (50%), Positives = 60/102 (58%)
 Frame = +1

Query: 31  VSGMDSHSALVANEPHQSMGDILTSMDTGLPLQVASHEVHVEKPTSKLNGSNNSAKRSNF 210
           ++ MDS S L A E  +SMG+IL SMD GLPL V+  E   EK   KL  SN + KRS F
Sbjct: 499 INEMDSPSILPAVESQRSMGEILASMDPGLPLPVSGLESSAEKAVGKLTSSNPNGKRSTF 558

Query: 211 LGRSKGRRNPXXXXXXXXXXXXFAIQRLELAKNDLLNRIAKE 336
            GRS  R+ P             AIQRLE+ KNDL +RIAKE
Sbjct: 559 WGRSTARKTPSTESVDSSGEEELAIQRLEITKNDLRHRIAKE 600


>ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|222845725|gb|EEE83272.1|
           predicted protein [Populus trichocarpa]
          Length = 876

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/103 (46%), Positives = 59/103 (57%)
 Frame = +1

Query: 28  SVSGMDSHSALVANEPHQSMGDILTSMDTGLPLQVASHEVHVEKPTSKLNGSNNSAKRSN 207
           S S MD+ S L   E +QSMG IL S D   P+ ++  E   EK   K++ SN + KRS 
Sbjct: 500 STSEMDASSVLPIGESYQSMGAILASADPVSPILISGLESSAEKSAGKVSASNLNGKRST 559

Query: 208 FLGRSKGRRNPXXXXXXXXXXXXFAIQRLELAKNDLLNRIAKE 336
           F GRS  R+ P            FAIQRLE+AKNDL +RIAKE
Sbjct: 560 FWGRSNARKTPSMESVDSSAEEEFAIQRLEIAKNDLRHRIAKE 602


>ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|222850410|gb|EEE87957.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/103 (42%), Positives = 58/103 (56%)
 Frame = +1

Query: 28  SVSGMDSHSALVANEPHQSMGDILTSMDTGLPLQVASHEVHVEKPTSKLNGSNNSAKRSN 207
           S + MD  S L   E ++SMG+IL+S+D   P+ ++  E   EK   K+  SN + KRS 
Sbjct: 496 SANEMDVSSVLPTGESYRSMGEILSSVDPVSPMPISGVESSAEKSAGKVAASNLNGKRST 555

Query: 208 FLGRSKGRRNPXXXXXXXXXXXXFAIQRLELAKNDLLNRIAKE 336
           F GRS  R+ P             AIQRLE+ KNDL +RIAKE
Sbjct: 556 FWGRSNARKTPSMESVDSSGEEELAIQRLEITKNDLRHRIAKE 598


>ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus communis]
           gi|223534625|gb|EEF36321.1| Rho GTPase activator,
           putative [Ricinus communis]
          Length = 821

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/102 (45%), Positives = 59/102 (57%)
 Frame = +1

Query: 31  VSGMDSHSALVANEPHQSMGDILTSMDTGLPLQVASHEVHVEKPTSKLNGSNNSAKRSNF 210
           V+ MD  SAL A E ++SMG+IL+SMD  + + +   E   EKP  K+   N + KRS F
Sbjct: 447 VNEMDVSSALPAGESYRSMGEILSSMDP-VAIPIPGLESSAEKPAGKVATPNANGKRSTF 505

Query: 211 LGRSKGRRNPXXXXXXXXXXXXFAIQRLELAKNDLLNRIAKE 336
            GRS  R+ P             AIQRLE+ KNDL +RIAKE
Sbjct: 506 WGRSNARKTPSVESVDSSGEEELAIQRLEITKNDLKHRIAKE 547


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