BLASTX nr result

ID: Coptis25_contig00032862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032862
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34670.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...    61   8e-08
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]    61   8e-08
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...    57   1e-06

>emb|CBI34670.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/76 (44%), Positives = 43/76 (56%)
 Frame = +2

Query: 2   DDFTEIXXXXXXXXXXXXXXXXXXXVASNEALRRDLVYQDSEEVRKMKKMGSLEERRKIE 181
           +DF EI                   V  N  L+R  +YQ SEEVRK KKMG++E RRKIE
Sbjct: 614 EDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIE 673

Query: 182 LSPSNDTSLSFRIFNT 229
           LS S+D+S  FRI ++
Sbjct: 674 LSRSSDSSFPFRIVDS 689


>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/76 (44%), Positives = 43/76 (56%)
 Frame = +2

Query: 2   DDFTEIXXXXXXXXXXXXXXXXXXXVASNEALRRDLVYQDSEEVRKMKKMGSLEERRKIE 181
           +DF EI                   V  N  L+R  +YQ SEEVRK KKMG++E RRKIE
Sbjct: 52  EDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIE 111

Query: 182 LSPSNDTSLSFRIFNT 229
           LS S+D+S  FRI ++
Sbjct: 112 LSRSSDSSFPFRIVDS 127


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/76 (44%), Positives = 43/76 (56%)
 Frame = +2

Query: 2   DDFTEIXXXXXXXXXXXXXXXXXXXVASNEALRRDLVYQDSEEVRKMKKMGSLEERRKIE 181
           +DF EI                   V  N  L+R  +YQ SEEVRK KKMG++E RRKIE
Sbjct: 231 EDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIE 290

Query: 182 LSPSNDTSLSFRIFNT 229
           LS S+D+S  FRI ++
Sbjct: 291 LSRSSDSSFPFRIVDS 306


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549704|gb|EEF51192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 736

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +2

Query: 86  NEALRRDLVYQDSEEVRKMKKMGSLEERRKIELSPSNDTSLSFRIFNT 229
           N  L+R  +YQ+S EVRKMKKMG  EER+KIELS  +DT+ SF I ++
Sbjct: 74  NTELKRGSIYQNSREVRKMKKMGIDEERKKIELSQDSDTTFSFNIVDS 121


Top