BLASTX nr result

ID: Coptis25_contig00032860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032860
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325137.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
emb|CBI40935.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002308399.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002271577.1| PREDICTED: probable LRR receptor-like serine...   138   5e-31
ref|XP_003518219.1| PREDICTED: probable LRR receptor-like serine...   130   8e-29

>ref|XP_002325137.1| predicted protein [Populus trichocarpa] gi|222866571|gb|EEF03702.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/113 (60%), Positives = 83/113 (73%)
 Frame = +3

Query: 144 MGFGFITSILFVSLFFKPLYSQQPNTDEFYVSDFVKKMAVTSSQEFNFSAPVCSWQGVFC 323
           MGFGF  S+L +SLFFKPL  QQPNTD F++S+F+K M +TSS  +NFSA VCSWQGVFC
Sbjct: 1   MGFGFFVSVLILSLFFKPLACQQPNTDGFFLSEFLKNMGLTSSPLYNFSASVCSWQGVFC 60

Query: 324 DAQRVNXXXXXXXXXXXXXXXPETTIGKLSKLQSLDLSNNRITSLSSDFWSIG 482
           DA++ +               P+TTIGKLSKLQ+LDLSNN+ITS  SD WS+G
Sbjct: 61  DAKKEHVVKFLASGLGLSGSIPDTTIGKLSKLQTLDLSNNKITSFPSDLWSLG 113


>emb|CBI40935.3| unnamed protein product [Vitis vinifera]
          Length = 763

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/123 (56%), Positives = 85/123 (69%)
 Frame = +3

Query: 114 LLTTFSPLSQMGFGFITSILFVSLFFKPLYSQQPNTDEFYVSDFVKKMAVTSSQEFNFSA 293
           L  +   LS MGFG +  +L ++LFF+PL  QQPNTD  +V DF++KM +TSSQ +NFS 
Sbjct: 50  LFLSVRTLSPMGFGSLGFLLVLTLFFRPLPCQQPNTDGSFVLDFLEKMGLTSSQVYNFSI 109

Query: 294 PVCSWQGVFCDAQRVNXXXXXXXXXXXXXXXPETTIGKLSKLQSLDLSNNRITSLSSDFW 473
           P CSW GVFCDA+  N               P+TTIGKLSKLQSLDLSNN+IT LSSDFW
Sbjct: 110 PFCSWPGVFCDAKEENVVGLVASGLGLSGLIPDTTIGKLSKLQSLDLSNNKITGLSSDFW 169

Query: 474 SIG 482
           S+G
Sbjct: 170 SLG 172


>ref|XP_002308399.1| predicted protein [Populus trichocarpa] gi|222854375|gb|EEE91922.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/113 (59%), Positives = 82/113 (72%)
 Frame = +3

Query: 144 MGFGFITSILFVSLFFKPLYSQQPNTDEFYVSDFVKKMAVTSSQEFNFSAPVCSWQGVFC 323
           MGF F+ SIL +SLFFKPL  QQPNTD F++S+F+K   +TSS  +N SA VCSWQGVFC
Sbjct: 1   MGFSFLRSILILSLFFKPLACQQPNTDGFFISEFLKNTGLTSSPLYNSSASVCSWQGVFC 60

Query: 324 DAQRVNXXXXXXXXXXXXXXXPETTIGKLSKLQSLDLSNNRITSLSSDFWSIG 482
           DA++ +               P+TTIGKLSKLQ+LDLSNN+ITSL SD WS+G
Sbjct: 61  DAKKEHVVEFLASGLGLSGSIPDTTIGKLSKLQTLDLSNNKITSLPSDLWSLG 113


>ref|XP_002271577.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g24230 [Vitis vinifera]
          Length = 853

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/113 (59%), Positives = 81/113 (71%)
 Frame = +3

Query: 144 MGFGFITSILFVSLFFKPLYSQQPNTDEFYVSDFVKKMAVTSSQEFNFSAPVCSWQGVFC 323
           MGFG +  +L ++LFF+PL  QQPNTD  +V DF++KM +TSSQ +NFS P CSW GVFC
Sbjct: 1   MGFGSLGFLLVLTLFFRPLPCQQPNTDGSFVLDFLEKMGLTSSQVYNFSIPFCSWPGVFC 60

Query: 324 DAQRVNXXXXXXXXXXXXXXXPETTIGKLSKLQSLDLSNNRITSLSSDFWSIG 482
           DA+  N               P+TTIGKLSKLQSLDLSNN+IT LSSDFWS+G
Sbjct: 61  DAKEENVVGLVASGLGLSGLIPDTTIGKLSKLQSLDLSNNKITGLSSDFWSLG 113


>ref|XP_003518219.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g24230-like [Glycine max]
          Length = 854

 Score =  130 bits (328), Expect = 8e-29
 Identities = 65/112 (58%), Positives = 78/112 (69%)
 Frame = +3

Query: 144 MGFGFITSILFVSLFFKPLYSQQPNTDEFYVSDFVKKMAVTSSQEFNFSAPVCSWQGVFC 323
           MG G   S+L ++L FK L SQQPNTDEF+VS+F+KKM + SSQ +NFSA VCSWQGV C
Sbjct: 1   MGLGVFGSVLVLALLFKHLASQQPNTDEFFVSEFLKKMGLASSQGYNFSASVCSWQGVSC 60

Query: 324 DAQRVNXXXXXXXXXXXXXXXPETTIGKLSKLQSLDLSNNRITSLSSDFWSI 479
           DA   +               P+ TIGKLSKLQSLDLS+N+IT L SDFWS+
Sbjct: 61  DANGEHIVDLVFSGMDLSGTMPDNTIGKLSKLQSLDLSHNKITGLPSDFWSL 112


Top