BLASTX nr result

ID: Coptis25_contig00032857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032857
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281333.2| PREDICTED: carotenoid 9,10(9',10')-cleavage ...   225   5e-57
emb|CBI20860.3| unnamed protein product [Vitis vinifera]              225   5e-57
emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]   224   7e-57
ref|XP_003633099.1| PREDICTED: LOW QUALITY PROTEIN: carotenoid 9...   223   2e-56
ref|XP_002281310.2| PREDICTED: carotenoid 9,10(9',10')-cleavage ...   223   2e-56

>ref|XP_002281333.2| PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like
           [Vitis vinifera]
          Length = 597

 Score =  225 bits (573), Expect = 5e-57
 Identities = 105/174 (60%), Positives = 130/174 (74%)
 Frame = -1

Query: 526 RYNIILDSPLTADINRLIKGGSLFMYRKEDHARMGVMPRYGDGNSVRWFEVAPHCTFHIV 347
           +Y +I+D PLT DINRLI GG L  Y KE +AR+GVMPRYG+ +SV+WFEV  HC FH  
Sbjct: 316 KYTVIMDFPLTIDINRLINGGPLIKYDKEGYARIGVMPRYGNADSVQWFEVEKHCLFHNF 375

Query: 346 NCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPLYQYDENASSNLEVGELFAR 167
           N FEDG EVV+RGCR+  + IPGPD G NK EWFS+GLKP+  + E+++ + + G LFAR
Sbjct: 376 NSFEDGNEVVIRGCRSPAAFIPGPDNGLNKFEWFSKGLKPIETFKESSTGSTQEGFLFAR 435

Query: 166 VYEWRLNMLSGEVKETSLTGTSFGMDLPMINEKYNGIRNKFGYAHVADPTASSS 5
           V EWRLNM +GEVKE +LTGT F MD PMINE + G++ K+GY  V D  ASSS
Sbjct: 436 VCEWRLNMETGEVKERNLTGTDFPMDFPMINEHFRGVKQKYGYTQVRDCMASSS 489


>emb|CBI20860.3| unnamed protein product [Vitis vinifera]
          Length = 567

 Score =  225 bits (573), Expect = 5e-57
 Identities = 105/174 (60%), Positives = 130/174 (74%)
 Frame = -1

Query: 526 RYNIILDSPLTADINRLIKGGSLFMYRKEDHARMGVMPRYGDGNSVRWFEVAPHCTFHIV 347
           +Y +I+D PLT DINRLI GG L  Y KE +AR+GVMPRYG+ +SV+WFEV  HC FH  
Sbjct: 279 KYTVIMDFPLTIDINRLINGGPLIKYDKEGYARIGVMPRYGNADSVQWFEVEKHCLFHNF 338

Query: 346 NCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPLYQYDENASSNLEVGELFAR 167
           N FEDG EVV+RGCR+  + IPGPD G NK EWFS+GLKP+  + E+++ + + G LFAR
Sbjct: 339 NSFEDGNEVVIRGCRSPAAFIPGPDNGLNKFEWFSKGLKPIETFKESSTGSTQEGFLFAR 398

Query: 166 VYEWRLNMLSGEVKETSLTGTSFGMDLPMINEKYNGIRNKFGYAHVADPTASSS 5
           V EWRLNM +GEVKE +LTGT F MD PMINE + G++ K+GY  V D  ASSS
Sbjct: 399 VCEWRLNMETGEVKERNLTGTDFPMDFPMINEHFRGVKQKYGYTQVRDCMASSS 452


>emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]
          Length = 1199

 Score =  224 bits (572), Expect = 7e-57
 Identities = 104/174 (59%), Positives = 131/174 (75%)
 Frame = -1

Query: 526  RYNIILDSPLTADINRLIKGGSLFMYRKEDHARMGVMPRYGDGNSVRWFEVAPHCTFHIV 347
            +YN+I+D PLT DINRL+ GG L  Y KE + R+GVMPRYG+ +SV+WF+V  +CT HI+
Sbjct: 911  KYNVIMDCPLTVDINRLVAGGPLIKYDKEGYTRIGVMPRYGNADSVKWFDVEANCTLHIL 970

Query: 346  NCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPLYQYDENASSNLEVGELFAR 167
            N FEDG EVVVRGCRA  S+IPGPD G NK EWFS G KP+   ++N++   + G LFA+
Sbjct: 971  NSFEDGNEVVVRGCRALESIIPGPDHGLNKFEWFSMGFKPIEISNKNSNGFTQEGFLFAQ 1030

Query: 166  VYEWRLNMLSGEVKETSLTGTSFGMDLPMINEKYNGIRNKFGYAHVADPTASSS 5
            VYEWRLNM +GEVKE +LTGT F M+ PMINE   G+++K+GY  V D  ASSS
Sbjct: 1031 VYEWRLNMETGEVKERNLTGTDFSMEFPMINEDLTGVKHKYGYTQVLDSMASSS 1084


>ref|XP_003633099.1| PREDICTED: LOW QUALITY PROTEIN: carotenoid 9,10(9',10')-cleavage
           dioxygenase-like [Vitis vinifera]
          Length = 611

 Score =  223 bits (568), Expect = 2e-56
 Identities = 102/173 (58%), Positives = 131/173 (75%)
 Frame = -1

Query: 526 RYNIILDSPLTADINRLIKGGSLFMYRKEDHARMGVMPRYGDGNSVRWFEVAPHCTFHIV 347
           +YN+I+D PLT D+NRL+ GG L  Y KE +AR+G+MPRYG+ +SV+WF+V  +CT HI+
Sbjct: 329 KYNVIMDCPLTVDMNRLVAGGPLIKYDKEGYARIGIMPRYGNADSVKWFDVEANCTLHIL 388

Query: 346 NCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPLYQYDENASSNLEVGELFAR 167
           N FEDG EVVVRGCRA  S+IPGPD G NK EWFS G KP+   ++N++   + G LFA 
Sbjct: 389 NSFEDGNEVVVRGCRALESIIPGPDQGLNKFEWFSMGFKPIQISNKNSNGFTQEGFLFAX 448

Query: 166 VYEWRLNMLSGEVKETSLTGTSFGMDLPMINEKYNGIRNKFGYAHVADPTASS 8
           VYEWRLNM +GEVKE +LTGT F M+ PMINE + G+++K+GY  V D  ASS
Sbjct: 449 VYEWRLNMETGEVKERNLTGTDFSMEFPMINEDFTGLKHKYGYTQVLDSMASS 501


>ref|XP_002281310.2| PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like
           [Vitis vinifera]
          Length = 590

 Score =  223 bits (568), Expect = 2e-56
 Identities = 103/174 (59%), Positives = 131/174 (75%)
 Frame = -1

Query: 526 RYNIILDSPLTADINRLIKGGSLFMYRKEDHARMGVMPRYGDGNSVRWFEVAPHCTFHIV 347
           +YN+I+D PLT D+NRL+ GG L  Y KE + R+GVMPRYG+ +SV+WF+V  +CT HI+
Sbjct: 309 KYNVIMDCPLTVDMNRLVAGGPLIKYDKEGYTRIGVMPRYGNADSVKWFDVEANCTLHIL 368

Query: 346 NCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPLYQYDENASSNLEVGELFAR 167
           N FEDG EVVVRGCRA  S+IPGPD G NK EWFS G KP+   ++N++   + G LFAR
Sbjct: 369 NSFEDGNEVVVRGCRALESIIPGPDQGLNKFEWFSMGFKPIEISNKNSNGFTQEGFLFAR 428

Query: 166 VYEWRLNMLSGEVKETSLTGTSFGMDLPMINEKYNGIRNKFGYAHVADPTASSS 5
           VYEWRLNM +GEVKE +LTGT   M+ PMINE + G+++K+GY  V D  ASSS
Sbjct: 429 VYEWRLNMETGEVKERNLTGTDVSMEFPMINEDFTGVKHKYGYTQVLDSMASSS 482


Top