BLASTX nr result

ID: Coptis25_contig00032852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032852
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...   104   9e-21
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...    99   4e-19
emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]    99   4e-19
ref|XP_002302805.1| outward rectifying potassium channel [Populu...    98   8e-19
ref|XP_003554573.1| PREDICTED: probable calcium-activated outwar...    94   9e-18

>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
           [Ricinus communis] gi|223545669|gb|EEF47173.1|
           Calcium-activated outward-rectifying potassium channel,
           putative [Ricinus communis]
          Length = 390

 Score =  104 bits (259), Expect = 9e-21
 Identities = 61/124 (49%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
 Frame = +3

Query: 57  ISNTPTPTQDEQLISEEIKD-PFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMAVMKD 233
           +S T +P+    ++  EI++ P        P T       KK   LHRSKTAPAM VM+D
Sbjct: 28  LSFTLSPSLSSPILFSEIQEQPVSTAILGAPSTQR-----KKPGSLHRSKTAPAMVVMRD 82

Query: 234 LKQNTPDQVDKPKNESVSVIRQXXXXXXXXXXXXXXIYSFNRDNFSGVETHPVIDALYFC 413
           LK   P Q  KP++ES S+IRQ              IYSFNRDNFSG+ETHPV+DALYFC
Sbjct: 83  LKP-LPPQDPKPQSESSSIIRQAIFLLFLYLLLGVVIYSFNRDNFSGIETHPVVDALYFC 141

Query: 414 IVTM 425
           IVTM
Sbjct: 142 IVTM 145


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/119 (46%), Positives = 72/119 (60%)
 Frame = +3

Query: 69  PTPTQDEQLISEEIKDPFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMAVMKDLKQNT 248
           P    +  + +++I+DP     S+       H  P+KT  +HR KTAPA+AVM+D K   
Sbjct: 38  PFNISEPTISNQDIRDPCAPGPSTT------HFLPRKT--IHRCKTAPALAVMRDAKSQ- 88

Query: 249 PDQVDKPKNESVSVIRQXXXXXXXXXXXXXXIYSFNRDNFSGVETHPVIDALYFCIVTM 425
           P Q+ KP ++S S+IRQ              IYSFNRDNFSG+ETH V+DALYFCIVTM
Sbjct: 89  PAQLPKPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTM 147


>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/119 (46%), Positives = 72/119 (60%)
 Frame = +3

Query: 69  PTPTQDEQLISEEIKDPFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMAVMKDLKQNT 248
           P    +  + +++I+DP     S+       H  P+KT  +HR KTAPA+AVM+D K   
Sbjct: 38  PFNISEPTISNQDIRDPCAPGPSTT------HFLPRKT--IHRCKTAPALAVMRDAKSQ- 88

Query: 249 PDQVDKPKNESVSVIRQXXXXXXXXXXXXXXIYSFNRDNFSGVETHPVIDALYFCIVTM 425
           P Q+ KP ++S S+IRQ              IYSFNRDNFSG+ETH V+DALYFCIVTM
Sbjct: 89  PAQLPKPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTM 147


>ref|XP_002302805.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222844531|gb|EEE82078.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 379

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 60/128 (46%), Positives = 75/128 (58%)
 Frame = +3

Query: 42  EAQAFISNTPTPTQDEQLISEEIKDPFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMA 221
           E Q FI  T T +    L+  EI+D   E ++  P     +   KK   LHRSKTAPAM 
Sbjct: 14  EPQPFI--TLTQSLSTPLLFHEIQD---EPTTPSPPPGPSNTRFKKPGTLHRSKTAPAMV 68

Query: 222 VMKDLKQNTPDQVDKPKNESVSVIRQXXXXXXXXXXXXXXIYSFNRDNFSGVETHPVIDA 401
           VM++ +   P Q+ KP++ES S+IRQ              IYSFN D+FSG ETHPV+DA
Sbjct: 69  VMREFQPTKP-QIPKPQSESNSIIRQAIFLLSLYLLLGVVIYSFNTDHFSGTETHPVVDA 127

Query: 402 LYFCIVTM 425
           LYFCIVTM
Sbjct: 128 LYFCIVTM 135


>ref|XP_003554573.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic-like [Glycine max]
          Length = 385

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 62/144 (43%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
 Frame = +3

Query: 12  IVLFSVKLFMEAQAFISNTPTPTQDEQL-ISEEIKDPFLERSSSVPKTL-----HGHGGP 173
           ++LFS    ME + F++ T  P  D  L  S+   D    R+  V              P
Sbjct: 5   LLLFSA---MEDEPFLTTTSQPIADCLLPSSKSFNDVTTTRARDVAAAAAEEIQSEQQQP 61

Query: 174 KKTSYLHRSKTAPAMAVMKDLKQNTPDQVDKPKNESVSVIRQXXXXXXXXXXXXXXIYSF 353
            K   L R KTAPAM  M+DLK  TP     PK +S S+IRQ              IYSF
Sbjct: 62  PKKKKLSRCKTAPAMVTMRDLKPKTPQL---PKPQSSSIIRQGMWLLAVYLSIGVVIYSF 118

Query: 354 NRDNFSGVETHPVIDALYFCIVTM 425
           NRD FSG+ETHPV+DALYFCIVTM
Sbjct: 119 NRDRFSGIETHPVVDALYFCIVTM 142


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