BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032828
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    61   8e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   4e-06
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    55   8e-06
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    55   8e-06

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -3

Query: 283 AWNCRGVGLDSTIRCLKDHIRVERPSIIFLCETKADVNKSSRILRSFASDYKSFV-IGSR 107
           AWNCRG+G  +T++ L+  I+     ++FLCET+  V K SR+ R  A  ++ FV + S 
Sbjct: 640 AWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLA--FRGFVGVSSE 697

Query: 106 GLSGGLWCLWQHELDVQI 53
           G SGGL   W   + V +
Sbjct: 698 GKSGGLALYWDESVSVDV 715


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -3

Query: 280 WNCRGVGLDSTIRCLKDHIRVERPSIIFLCETKADVNKS-SRILRSFASDYKSFVIGSRG 104
           WNCRGVG   T+R L+       P I+FL ET   +NK+ S  L+S      +F + SRG
Sbjct: 6   WNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETM--INKTESEALKSRLGFANAFGVSSRG 63

Query: 103 LSGGLWCLWQHELDVQIV 50
            +GGL   W+ EL   +V
Sbjct: 64  RAGGLCVFWREELSFSLV 81


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
 Frame = -3

Query: 283 AWNCRGVGLDSTIRCLKDHIRVERPSIIFLCETKADVNKSSRI-----LRSFASDYKSFV 119
           +WNCRG+G  +T++ L   ++      +FLCET+  V+K  R+     LR FA       
Sbjct: 438 SWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAG------ 491

Query: 118 IGSRGLSGGLWCLWQHELDVQIVWSDSWIIHAAV 17
           + S G+SGGL   W   + V+I+  +   I A +
Sbjct: 492 VSSDGMSGGLALFWHESVHVEILNKNERFIDAYI 525


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
 Frame = -3

Query: 283 AWNCRGVGLDSTIRCLKDHIRVERPSIIFLCETKADVNKSSRI-----LRSFASDYKSFV 119
           +WNCRG+G  +T++ L   ++      +FLCET+  V+K  R+     LR FA       
Sbjct: 466 SWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAG------ 519

Query: 118 IGSRGLSGGLWCLWQHELDVQIVWSDSWIIHAAV 17
           + S G+SGGL   W   + V+I+  +   I A +
Sbjct: 520 VSSDGMSGGLALFWHESVHVEILNKNERFIDAYI 553