BLASTX nr result

ID: Coptis25_contig00032827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032827
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515970.1| ATP-binding cassette transporter, putative [...    62   6e-08
ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
gb|ACZ98533.1| putative ABC transporter [Malus x domestica]            59   5e-07
gb|ADE76956.1| unknown [Picea sitchensis]                              59   5e-07
ref|XP_003567064.1| PREDICTED: pleiotropic drug resistance prote...    58   9e-07

>ref|XP_002515970.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223544875|gb|EEF46390.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1497

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = -2

Query: 216 KLGWVSVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXX 37
           KLG ++VL+  GV    N++WIGAGAL+ F I+F+VLFTFALMYL+P +K          
Sbjct: 754 KLG-IAVLEDLGVFQNENWYWIGAGALLGFAILFNVLFTFALMYLSPPEKKQAIISEETA 812

Query: 36  QGIEGNQ 16
             +EG +
Sbjct: 813 VEMEGEE 819


>ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|222866274|gb|EEF03405.1|
           predicted protein [Populus trichocarpa]
          Length = 1429

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = -2

Query: 204 VSVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXXQGIE 25
           V VL+S G+ P+ +++WIG GAL+ +T++F+ LFT AL YLNP  K              
Sbjct: 735 VVVLKSRGIFPEAHWYWIGIGALIGYTLLFNFLFTLALKYLNPFGKPQAMLSKEALAERN 794

Query: 24  GNQTGETN 1
            N+TG+++
Sbjct: 795 ANRTGDSS 802


>gb|ACZ98533.1| putative ABC transporter [Malus x domestica]
          Length = 1427

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/66 (45%), Positives = 42/66 (63%)
 Frame = -2

Query: 201 SVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXXQGIEG 22
           ++L++  + PQ  +FWIGAGAL+ +TI+F++LFTF L YLNPL K          Q  E 
Sbjct: 718 ALLRARSLFPQSYWFWIGAGALLGYTILFNMLFTFFLAYLNPLGKRQAVVTKEELQERER 777

Query: 21  NQTGET 4
            + GET
Sbjct: 778 RRKGET 783


>gb|ADE76956.1| unknown [Picea sitchensis]
          Length = 207

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = -2

Query: 201 SVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXXQGIEG 22
           +VL+S G+  +  F+WIG GAL+ F ++F+VL+T AL +LNPL            +  + 
Sbjct: 22  AVLESRGLFAEAKFYWIGIGALIGFCVLFNVLYTVALTFLNPLGNSQAVISEDVIEDKQA 81

Query: 21  NQTGETN 1
           N TGE+N
Sbjct: 82  NITGESN 88


>ref|XP_003567064.1| PREDICTED: pleiotropic drug resistance protein 15-like
           [Brachypodium distachyon]
          Length = 1465

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = -2

Query: 204 VSVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDK 67
           V+VLQ++GV     ++WI  GAL+ FT++F+VLFT +LMYLNP+ K
Sbjct: 737 VAVLQNSGVFTDKEWYWIATGALLGFTVLFNVLFTVSLMYLNPIGK 782


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