BLASTX nr result
ID: Coptis25_contig00032827
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032827 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515970.1| ATP-binding cassette transporter, putative [... 62 6e-08 ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 gb|ACZ98533.1| putative ABC transporter [Malus x domestica] 59 5e-07 gb|ADE76956.1| unknown [Picea sitchensis] 59 5e-07 ref|XP_003567064.1| PREDICTED: pleiotropic drug resistance prote... 58 9e-07 >ref|XP_002515970.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223544875|gb|EEF46390.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 1497 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/67 (47%), Positives = 44/67 (65%) Frame = -2 Query: 216 KLGWVSVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXX 37 KLG ++VL+ GV N++WIGAGAL+ F I+F+VLFTFALMYL+P +K Sbjct: 754 KLG-IAVLEDLGVFQNENWYWIGAGALLGFAILFNVLFTFALMYLSPPEKKQAIISEETA 812 Query: 36 QGIEGNQ 16 +EG + Sbjct: 813 VEMEGEE 819 >ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|222866274|gb|EEF03405.1| predicted protein [Populus trichocarpa] Length = 1429 Score = 60.5 bits (145), Expect = 1e-07 Identities = 27/68 (39%), Positives = 42/68 (61%) Frame = -2 Query: 204 VSVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXXQGIE 25 V VL+S G+ P+ +++WIG GAL+ +T++F+ LFT AL YLNP K Sbjct: 735 VVVLKSRGIFPEAHWYWIGIGALIGYTLLFNFLFTLALKYLNPFGKPQAMLSKEALAERN 794 Query: 24 GNQTGETN 1 N+TG+++ Sbjct: 795 ANRTGDSS 802 >gb|ACZ98533.1| putative ABC transporter [Malus x domestica] Length = 1427 Score = 58.5 bits (140), Expect = 5e-07 Identities = 30/66 (45%), Positives = 42/66 (63%) Frame = -2 Query: 201 SVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXXQGIEG 22 ++L++ + PQ +FWIGAGAL+ +TI+F++LFTF L YLNPL K Q E Sbjct: 718 ALLRARSLFPQSYWFWIGAGALLGYTILFNMLFTFFLAYLNPLGKRQAVVTKEELQERER 777 Query: 21 NQTGET 4 + GET Sbjct: 778 RRKGET 783 >gb|ADE76956.1| unknown [Picea sitchensis] Length = 207 Score = 58.5 bits (140), Expect = 5e-07 Identities = 27/67 (40%), Positives = 41/67 (61%) Frame = -2 Query: 201 SVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDKXXXXXXXXXXQGIEG 22 +VL+S G+ + F+WIG GAL+ F ++F+VL+T AL +LNPL + + Sbjct: 22 AVLESRGLFAEAKFYWIGIGALIGFCVLFNVLYTVALTFLNPLGNSQAVISEDVIEDKQA 81 Query: 21 NQTGETN 1 N TGE+N Sbjct: 82 NITGESN 88 >ref|XP_003567064.1| PREDICTED: pleiotropic drug resistance protein 15-like [Brachypodium distachyon] Length = 1465 Score = 57.8 bits (138), Expect = 9e-07 Identities = 25/46 (54%), Positives = 36/46 (78%) Frame = -2 Query: 204 VSVLQSNGVIPQINFFWIGAGALVCFTIIFHVLFTFALMYLNPLDK 67 V+VLQ++GV ++WI GAL+ FT++F+VLFT +LMYLNP+ K Sbjct: 737 VAVLQNSGVFTDKEWYWIATGALLGFTVLFNVLFTVSLMYLNPIGK 782