BLASTX nr result

ID: Coptis25_contig00032818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032818
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arab...   119   3e-25
gb|ABK28123.1| unknown [Arabidopsis thaliana]                         119   3e-25
gb|ABF59464.1| unknown protein [Arabidopsis thaliana]                 119   3e-25
ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828...   117   1e-24
gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana]             115   3e-24

>ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arabidopsis lyrata subsp.
           lyrata] gi|297319667|gb|EFH50089.1| hypothetical protein
           ARALYDRAFT_909742 [Arabidopsis lyrata subsp. lyrata]
          Length = 73

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/71 (73%), Positives = 58/71 (81%)
 Frame = -3

Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119
           FP+CIQCGTR NPCRCKV GPTLG         +EWP+GAVVY+F+HAKGRRIMGHP R 
Sbjct: 3   FPACIQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARR 62

Query: 118 VYPKVSRAIPI 86
           VYPKVSR+IPI
Sbjct: 63  VYPKVSRSIPI 73


>gb|ABK28123.1| unknown [Arabidopsis thaliana]
          Length = 74

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/71 (71%), Positives = 58/71 (81%)
 Frame = -3

Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119
           FP+C+QCGTR NPCRCKV GPTLG         +EWP+GAVVY+F+HAKGRRIMGHP R 
Sbjct: 3   FPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARK 62

Query: 118 VYPKVSRAIPI 86
           VYPKVSR+IPI
Sbjct: 63  VYPKVSRSIPI 73


>gb|ABF59464.1| unknown protein [Arabidopsis thaliana]
          Length = 73

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/71 (71%), Positives = 58/71 (81%)
 Frame = -3

Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119
           FP+C+QCGTR NPCRCKV GPTLG         +EWP+GAVVY+F+HAKGRRIMGHP R 
Sbjct: 3   FPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARK 62

Query: 118 VYPKVSRAIPI 86
           VYPKVSR+IPI
Sbjct: 63  VYPKVSRSIPI 73


>ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828693 [Brachypodium
           distachyon]
          Length = 74

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/70 (74%), Positives = 57/70 (81%)
 Frame = -3

Query: 295 PSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRVV 116
           P+C+QCGTRSNPCRCKV GPTLG         VEWP+GA VYLFRH KGRRIMGHP RVV
Sbjct: 5   PACVQCGTRSNPCRCKVVGPTLGFVAFLVTGVVEWPLGAAVYLFRHRKGRRIMGHPARVV 64

Query: 115 YPKVSRAIPI 86
           YP+V+RAIPI
Sbjct: 65  YPRVTRAIPI 74


>gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana]
          Length = 73

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = -3

Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119
           FP+C+QCGTR NPCRCKV  PTLG         +EWP+GAVVY+F+HAKGRRIMGHP R 
Sbjct: 3   FPACVQCGTRQNPCRCKVVEPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARK 62

Query: 118 VYPKVSRAIPI 86
           VYPKVSR+IPI
Sbjct: 63  VYPKVSRSIPI 73


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