BLASTX nr result
ID: Coptis25_contig00032818
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032818 (468 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arab... 119 3e-25 gb|ABK28123.1| unknown [Arabidopsis thaliana] 119 3e-25 gb|ABF59464.1| unknown protein [Arabidopsis thaliana] 119 3e-25 ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828... 117 1e-24 gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana] 115 3e-24 >ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arabidopsis lyrata subsp. lyrata] gi|297319667|gb|EFH50089.1| hypothetical protein ARALYDRAFT_909742 [Arabidopsis lyrata subsp. lyrata] Length = 73 Score = 119 bits (297), Expect = 3e-25 Identities = 52/71 (73%), Positives = 58/71 (81%) Frame = -3 Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119 FP+CIQCGTR NPCRCKV GPTLG +EWP+GAVVY+F+HAKGRRIMGHP R Sbjct: 3 FPACIQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARR 62 Query: 118 VYPKVSRAIPI 86 VYPKVSR+IPI Sbjct: 63 VYPKVSRSIPI 73 >gb|ABK28123.1| unknown [Arabidopsis thaliana] Length = 74 Score = 119 bits (297), Expect = 3e-25 Identities = 51/71 (71%), Positives = 58/71 (81%) Frame = -3 Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119 FP+C+QCGTR NPCRCKV GPTLG +EWP+GAVVY+F+HAKGRRIMGHP R Sbjct: 3 FPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARK 62 Query: 118 VYPKVSRAIPI 86 VYPKVSR+IPI Sbjct: 63 VYPKVSRSIPI 73 >gb|ABF59464.1| unknown protein [Arabidopsis thaliana] Length = 73 Score = 119 bits (297), Expect = 3e-25 Identities = 51/71 (71%), Positives = 58/71 (81%) Frame = -3 Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119 FP+C+QCGTR NPCRCKV GPTLG +EWP+GAVVY+F+HAKGRRIMGHP R Sbjct: 3 FPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARK 62 Query: 118 VYPKVSRAIPI 86 VYPKVSR+IPI Sbjct: 63 VYPKVSRSIPI 73 >ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828693 [Brachypodium distachyon] Length = 74 Score = 117 bits (293), Expect = 1e-24 Identities = 52/70 (74%), Positives = 57/70 (81%) Frame = -3 Query: 295 PSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRVV 116 P+C+QCGTRSNPCRCKV GPTLG VEWP+GA VYLFRH KGRRIMGHP RVV Sbjct: 5 PACVQCGTRSNPCRCKVVGPTLGFVAFLVTGVVEWPLGAAVYLFRHRKGRRIMGHPARVV 64 Query: 115 YPKVSRAIPI 86 YP+V+RAIPI Sbjct: 65 YPRVTRAIPI 74 >gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana] Length = 73 Score = 115 bits (289), Expect = 3e-24 Identities = 50/71 (70%), Positives = 57/71 (80%) Frame = -3 Query: 298 FPSCIQCGTRSNPCRCKVFGPTLGXXXXXXXXXVEWPIGAVVYLFRHAKGRRIMGHPVRV 119 FP+C+QCGTR NPCRCKV PTLG +EWP+GAVVY+F+HAKGRRIMGHP R Sbjct: 3 FPACVQCGTRQNPCRCKVVEPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPARK 62 Query: 118 VYPKVSRAIPI 86 VYPKVSR+IPI Sbjct: 63 VYPKVSRSIPI 73