BLASTX nr result
ID: Coptis25_contig00032813
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032813 (225 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF79821.1|AC026875_1 T6D22.1 [Arabidopsis thaliana] 119 3e-25 gb|AAB07881.1| AT.I.24-9 gene product, partial [Arabidopsis thal... 119 3e-25 ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|... 119 3e-25 ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|... 119 3e-25 ref|XP_002870588.1| translation elongation factor EF-1 alpha [Ar... 119 3e-25 >gb|AAF79821.1|AC026875_1 T6D22.1 [Arabidopsis thaliana] Length = 1417 Score = 119 bits (298), Expect = 3e-25 Identities = 55/74 (74%), Positives = 65/74 (87%) Frame = -2 Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45 RV QRVNHPG LDK S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+ Sbjct: 1113 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 1172 Query: 44 PLPSPLKCALEKGI 3 PLP P+K LE+GI Sbjct: 1173 PLPDPVKSVLEEGI 1186 >gb|AAB07881.1| AT.I.24-9 gene product, partial [Arabidopsis thaliana] Length = 822 Score = 119 bits (298), Expect = 3e-25 Identities = 55/74 (74%), Positives = 65/74 (87%) Frame = -2 Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45 RV QRVNHPG LDK S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+ Sbjct: 519 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 578 Query: 44 PLPSPLKCALEKGI 3 PLP P+K LE+GI Sbjct: 579 PLPDPVKSVLEEGI 592 >ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|297335515|gb|EFH65932.1| ATRNL [Arabidopsis lyrata subsp. lyrata] Length = 1096 Score = 119 bits (298), Expect = 3e-25 Identities = 55/74 (74%), Positives = 65/74 (87%) Frame = -2 Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45 RV QRVNHPG LDK S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+ Sbjct: 792 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRA 851 Query: 44 PLPSPLKCALEKGI 3 PLP P+K LE+GI Sbjct: 852 PLPDPVKSVLEEGI 865 >ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|297320893|gb|EFH51315.1| ATRNL [Arabidopsis lyrata subsp. lyrata] Length = 1064 Score = 119 bits (298), Expect = 3e-25 Identities = 55/74 (74%), Positives = 65/74 (87%) Frame = -2 Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45 RV QRVNHPG LDK S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+ Sbjct: 760 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 819 Query: 44 PLPSPLKCALEKGI 3 PLP P+K LE+GI Sbjct: 820 PLPDPVKSVLEEGI 833 >ref|XP_002870588.1| translation elongation factor EF-1 alpha [Arabidopsis lyrata subsp. lyrata] gi|297316424|gb|EFH46847.1| translation elongation factor EF-1 alpha [Arabidopsis lyrata subsp. lyrata] Length = 381 Score = 119 bits (298), Expect = 3e-25 Identities = 55/74 (74%), Positives = 65/74 (87%) Frame = -2 Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45 RV QRVNHPG LDK S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+ Sbjct: 77 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 136 Query: 44 PLPSPLKCALEKGI 3 PLP P+K LE+GI Sbjct: 137 PLPDPVKSVLEEGI 150