BLASTX nr result

ID: Coptis25_contig00032813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032813
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79821.1|AC026875_1 T6D22.1 [Arabidopsis thaliana]               119   3e-25
gb|AAB07881.1| AT.I.24-9 gene product, partial [Arabidopsis thal...   119   3e-25
ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|...   119   3e-25
ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|...   119   3e-25
ref|XP_002870588.1| translation elongation factor EF-1 alpha [Ar...   119   3e-25

>gb|AAF79821.1|AC026875_1 T6D22.1 [Arabidopsis thaliana]
          Length = 1417

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = -2

Query: 224  RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45
            RV QRVNHPG LDK  S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+
Sbjct: 1113 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 1172

Query: 44   PLPSPLKCALEKGI 3
            PLP P+K  LE+GI
Sbjct: 1173 PLPDPVKSVLEEGI 1186


>gb|AAB07881.1| AT.I.24-9 gene product, partial [Arabidopsis thaliana]
          Length = 822

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = -2

Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45
           RV QRVNHPG LDK  S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+
Sbjct: 519 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 578

Query: 44  PLPSPLKCALEKGI 3
           PLP P+K  LE+GI
Sbjct: 579 PLPDPVKSVLEEGI 592


>ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|297335515|gb|EFH65932.1|
            ATRNL [Arabidopsis lyrata subsp. lyrata]
          Length = 1096

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = -2

Query: 224  RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45
            RV QRVNHPG LDK  S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+
Sbjct: 792  RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRA 851

Query: 44   PLPSPLKCALEKGI 3
            PLP P+K  LE+GI
Sbjct: 852  PLPDPVKSVLEEGI 865


>ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata]
           gi|297320893|gb|EFH51315.1| ATRNL [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1064

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = -2

Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45
           RV QRVNHPG LDK  S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+
Sbjct: 760 RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 819

Query: 44  PLPSPLKCALEKGI 3
           PLP P+K  LE+GI
Sbjct: 820 PLPDPVKSVLEEGI 833


>ref|XP_002870588.1| translation elongation factor EF-1 alpha [Arabidopsis lyrata subsp.
           lyrata] gi|297316424|gb|EFH46847.1| translation
           elongation factor EF-1 alpha [Arabidopsis lyrata subsp.
           lyrata]
          Length = 381

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = -2

Query: 224 RVFQRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRS 45
           RV QRVNHPG LDK  S+AGYVLLMFYHL+EGKNR EFESEL ERFG+++KMPL+K+DR+
Sbjct: 77  RVLQRVNHPGKLDKESSNAGYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRT 136

Query: 44  PLPSPLKCALEKGI 3
           PLP P+K  LE+GI
Sbjct: 137 PLPDPVKSVLEEGI 150


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