BLASTX nr result

ID: Coptis25_contig00032809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032809
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253...    99   5e-19
gb|ABK95458.1| unknown [Populus trichocarpa]                           91   7e-17
ref|XP_002308239.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
emb|CBI36936.3| unnamed protein product [Vitis vinifera]               84   9e-15
gb|ACU20899.1| unknown [Glycine max]                                   81   1e-13

>ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253802 [Vitis vinifera]
          Length = 163

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/96 (53%), Positives = 67/96 (69%)
 Frame = +3

Query: 90  SSKPTTANFFDSEGHLQRVELPVKAAELMLEAPGSIVCPVEELRKTRVVWALRADEELQA 269
           SS P TA  FD+ G+L+RV++PV AAELMLE PG +V  V++LR+TR + A+RAD+ L  
Sbjct: 12  SSTPKTAKLFDAHGNLRRVKVPVTAAELMLEEPGYVVSRVDDLRRTRRIPAMRADDVLLE 71

Query: 270 GKYYLMFPAKKVYSKVSETEMKLIDTACRKKGKTVG 377
           GK YLM P  +V+  VSE EM LI  A +K+ K  G
Sbjct: 72  GKAYLMMPVSRVHCVVSEVEMALIAAASKKRSKKRG 107


>gb|ABK95458.1| unknown [Populus trichocarpa]
          Length = 167

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
 Frame = +3

Query: 90  SSKPTTANFFDSEGHLQRVELPVKAAELMLEAPGSIVCPVEELRKTRVVWALRADEELQA 269
           SSKP TA   +S+G+L++V LPVKAAELMLE PG ++ PV+EL++     A+RAD+EL  
Sbjct: 14  SSKPKTAKLINSQGNLRQVSLPVKAAELMLEEPGHVIAPVDELKQRSRTIAMRADDELLP 73

Query: 270 GKYYLMFPAKKVYSKVSETEMKLIDT---ACRKK 362
           GK YL  P  K   K+S +E+ +I++   AC K+
Sbjct: 74  GKVYLSVPLSKANCKISASELAIIESTIAACAKR 107


>ref|XP_002308239.1| predicted protein [Populus trichocarpa] gi|222854215|gb|EEE91762.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
 Frame = +3

Query: 90  SSKPTTANFFDSEGHLQRVELPVKAAELMLEAPGSIVCPVEELRKTRVVWALRADEELQA 269
           S KP TA   +S+G+L++V LPVKAAELMLE PG ++ PV+EL++     A+RAD+EL  
Sbjct: 14  SRKPKTAKLINSQGNLRQVSLPVKAAELMLEEPGHVIAPVDELKQRSRTIAMRADDELLP 73

Query: 270 GKYYLMFPAKKVYSKVSETEMKLIDT---ACRKK 362
           GK YL  P  K   K+S +E+ +I++   AC K+
Sbjct: 74  GKVYLSVPLSKANCKISASELAIIESTIAACAKR 107


>emb|CBI36936.3| unnamed protein product [Vitis vinifera]
          Length = 121

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = +3

Query: 90  SSKPTTANFFDSEGHLQRVELPVKAAELMLEAPGSIVCPVEELRKTRVVWALRADEELQA 269
           SS P TA  FD+ G+L+RV++PV AAELMLE PG +V  V++LR+TR + A+RAD+ L  
Sbjct: 12  SSTPKTAKLFDAHGNLRRVKVPVTAAELMLEEPGYVVSRVDDLRRTRRIPAMRADDVLLE 71

Query: 270 GKYYLMFPAKKVYSKV 317
           GK YLM P  +V S+V
Sbjct: 72  GKAYLMMPVSRVQSRV 87


>gb|ACU20899.1| unknown [Glycine max]
          Length = 171

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/80 (48%), Positives = 56/80 (70%)
 Frame = +3

Query: 105 TANFFDSEGHLQRVELPVKAAELMLEAPGSIVCPVEELRKTRVVWALRADEELQAGKYYL 284
           TA   DS+G+ + ++LP+K+ ELM+E  G +V PV+E+R+T  V AL ADEEL AGK YL
Sbjct: 32  TAMLLDSDGNTREIKLPIKSGELMIEEFGHVVTPVDEIRRTGRVSALLADEELVAGKVYL 91

Query: 285 MFPAKKVYSKVSETEMKLID 344
           + P  ++ SK SE EM + +
Sbjct: 92  LLPVNRINSKASEFEMAIAE 111


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