BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032805
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92857.1| unknown [Populus trichocarpa]                          100   1e-19
ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...   100   2e-19
ref|XP_002322885.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus ...    98   8e-19
ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...    97   1e-18

>gb|ABK92857.1| unknown [Populus trichocarpa]
          Length = 363

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/92 (55%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
 Frame = +2

Query: 119 RNLSTNGDVSINTNNK-------PIIVTLFPGNGVGPVVARSVKEVLSMAQVPIRWEEHY 277
           R L  +G   I++  +       PII TLFPG+GVGP +A SVK+V   A+VPI WEEHY
Sbjct: 9   RVLGASGSTQISSTARAFSSAPAPIIATLFPGDGVGPEIAESVKQVFQAAEVPIEWEEHY 68

Query: 278 VGDVVDSTTQSYLTRESLDSVLRNGVGLKAPV 373
           VGD +D  TQS+LT ESL+SV RN VGLK P+
Sbjct: 69  VGDQIDPRTQSFLTWESLESVRRNRVGLKGPM 100


>ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Cucumis sativus]
           gi|449524456|ref|XP_004169239.1| PREDICTED: isocitrate
           dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Cucumis sativus]
          Length = 372

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = +2

Query: 50  LSVQLLFLKNSTTTTRVFSCTNHRNLSTNGDV-SINTNNKPIIVTLFPGNGVGPVVARSV 226
           ++ QLL     + + ++FS ++  N S+     + ++   PI  TLFPG+G+GP +A SV
Sbjct: 1   MASQLLKRALRSQSGQIFSLSSSLNSSSPFPFRAFSSAATPIRATLFPGDGIGPEIAESV 60

Query: 227 KEVLSMAQVPIRWEEHYVGDVVDSTTQSYLTRESLDSVLRNGVGLKAPV 373
           K+V   A VPI WEEHYVGD +D  TQS+LT ESL+SV RNGVGLK P+
Sbjct: 61  KQVFRTADVPIEWEEHYVGDEIDPRTQSFLTWESLESVRRNGVGLKGPM 109


>ref|XP_002322885.1| predicted protein [Populus trichocarpa] gi|222867515|gb|EEF04646.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
 Frame = +2

Query: 119 RNLSTNGDVSINTNNK-------PIIVTLFPGNGVGPVVARSVKEVLSMAQVPIRWEEHY 277
           R L  +G   I++  +       PII TLFPG+G+GP +A SVK+V   A+VPI WEEHY
Sbjct: 9   RVLGASGSTQISSTARAFSSAPAPIIATLFPGDGIGPEIAESVKQVFQAAEVPIEWEEHY 68

Query: 278 VGDVVDSTTQSYLTRESLDSVLRNGVGLKAPV 373
           VGD +D  TQS+LT ESL+SV RN VGLK P+
Sbjct: 69  VGDQIDPRTQSFLTWESLESVRRNRVGLKGPM 100


>ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223541383|gb|EEF42934.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 364

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/73 (61%), Positives = 56/73 (76%)
 Frame = +2

Query: 155 TNNKPIIVTLFPGNGVGPVVARSVKEVLSMAQVPIRWEEHYVGDVVDSTTQSYLTRESLD 334
           + + PI  TLFPG+G+GP +A SVK+V   A+VPI WEEHYVGD +D  TQS+LT ESL+
Sbjct: 29  STSTPITATLFPGDGIGPEIAESVKQVFKEAEVPIEWEEHYVGDQIDPRTQSFLTWESLE 88

Query: 335 SVLRNGVGLKAPV 373
           SV RN VGLK P+
Sbjct: 89  SVRRNRVGLKGPM 101


>ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Vitis vinifera]
          Length = 367

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = +2

Query: 71  LKNSTTTTRVFSCTNHRNLSTNGDVSINTNNKPIIVTLFPGNGVGPVVARSVKEVLSMAQ 250
           L  S  ++R FS  N R+ S++     ++++  I  TLFPG+G+GP +A +VK+V   A 
Sbjct: 10  LLGSPNSSRAFSSFN-RSFSSS-----DSSSNLIRATLFPGDGIGPEIAEAVKQVFRAAD 63

Query: 251 VPIRWEEHYVGDVVDSTTQSYLTRESLDSVLRNGVGLKAPV 373
           VPI WEEHYVGD +D  TQS+LT ESL+SV +NGVGLK P+
Sbjct: 64  VPIEWEEHYVGDQIDPRTQSFLTWESLESVRQNGVGLKGPM 104