BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032802
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24313.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_002523226.1| pentatricopeptide repeat-containing protein,...   150   8e-35
ref|XP_002868306.1| pentatricopeptide repeat-containing protein ...   145   3e-33
ref|NP_193153.3| pentatricopeptide repeat-containing protein [Ar...   138   5e-31

>emb|CBI24313.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/105 (67%), Positives = 89/105 (84%)
 Frame = +2

Query: 11  LKNYASLVDCLGKAGLIAEAERFVKEMPMEPDAAVLGALLGGCRIHGNIEVGERVANKLL 190
           LK+YA +VDCLG+AG++ +AERF++EMP+E D AVLGALLGGCR+HGN EVGERVA KL+
Sbjct: 299 LKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGALLGGCRVHGNAEVGERVAKKLM 358

Query: 191 KLEPDEGGYYMLLANMYADSGRYNDAEKVRDFMKQRSASKVPGCS 325
            LEP++   Y++LAN+YA +GR+ DAEKVR  MKQR  SKVPGCS
Sbjct: 359 GLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSKVPGCS 403


>ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14170-like [Vitis vinifera]
          Length = 455

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/105 (67%), Positives = 89/105 (84%)
 Frame = +2

Query: 11  LKNYASLVDCLGKAGLIAEAERFVKEMPMEPDAAVLGALLGGCRIHGNIEVGERVANKLL 190
           LK+YA +VDCLG+AG++ +AERF++EMP+E D AVLGALLGGCR+HGN EVGERVA KL+
Sbjct: 347 LKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGALLGGCRVHGNAEVGERVAKKLM 406

Query: 191 KLEPDEGGYYMLLANMYADSGRYNDAEKVRDFMKQRSASKVPGCS 325
            LEP++   Y++LAN+YA +GR+ DAEKVR  MKQR  SKVPGCS
Sbjct: 407 GLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSKVPGCS 451


>ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537522|gb|EEF39147.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 488

 Score =  150 bits (380), Expect = 8e-35
 Identities = 65/108 (60%), Positives = 92/108 (85%)
 Frame = +2

Query: 2   VAGLKNYASLVDCLGKAGLIAEAERFVKEMPMEPDAAVLGALLGGCRIHGNIEVGERVAN 181
           VA L++YA++VDCL +AG   EAE+F+ ++PMEPD AVLGA+L GCR+H N+EVGER+A 
Sbjct: 373 VAELRHYATIVDCLARAGRFEEAEKFISDIPMEPDEAVLGAILAGCRVHNNVEVGERIAK 432

Query: 182 KLLKLEPDEGGYYMLLANMYADSGRYNDAEKVRDFMKQRSASKVPGCS 325
           +L++L+P++ GYY+LLANMYA  GR+++AE VRD M++++ SKVPGCS
Sbjct: 433 RLIRLKPEKAGYYVLLANMYAGVGRFHEAEMVRDSMQEKNMSKVPGCS 480


>ref|XP_002868306.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314142|gb|EFH44565.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 458

 Score =  145 bits (366), Expect = 3e-33
 Identities = 63/110 (57%), Positives = 91/110 (82%)
 Frame = +2

Query: 2   VAGLKNYASLVDCLGKAGLIAEAERFVKEMPMEPDAAVLGALLGGCRIHGNIEVGERVAN 181
           V  LK+YAS+ DC+ +AGL+ EAE+F+++MP+EPD AVLGA+L GC+++GN+EVGERVA 
Sbjct: 349 VPELKHYASVADCMSRAGLLEEAEKFLEDMPVEPDEAVLGAVLSGCKVYGNVEVGERVAR 408

Query: 182 KLLKLEPDEGGYYMLLANMYADSGRYNDAEKVRDFMKQRSASKVPGCSQI 331
           KL++LEP +G YY+ LA +Y+ +GR+++AE +R  MK++  SKVPGCS I
Sbjct: 409 KLIQLEPRKGSYYVTLAGLYSAAGRFDEAESLRQLMKEKQISKVPGCSSI 458


>ref|NP_193153.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635637|sp|Q5XEY7.2|PP309_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14170 gi|332657989|gb|AEE83389.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 477

 Score =  138 bits (347), Expect = 5e-31
 Identities = 58/110 (52%), Positives = 91/110 (82%)
 Frame = +2

Query: 2   VAGLKNYASLVDCLGKAGLIAEAERFVKEMPMEPDAAVLGALLGGCRIHGNIEVGERVAN 181
           V  LK+YAS+ DC+ +AGL+ EAE+F+++MP++PD AV+GA+L GC+++GN+EVGERVA 
Sbjct: 368 VPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVAR 427

Query: 182 KLLKLEPDEGGYYMLLANMYADSGRYNDAEKVRDFMKQRSASKVPGCSQI 331
           +L++L+P +  YY+ LA +Y+ +GR+++AE +R +MK++  SKVPGCS I
Sbjct: 428 ELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477