BLASTX nr result

ID: Coptis25_contig00032787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032787
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315734.1| magnesium transporter [Populus trichocarpa] ...    78   8e-13
ref|XP_002311660.1| magnesium transporter [Populus trichocarpa] ...    78   8e-13
ref|XP_004150432.1| PREDICTED: magnesium transporter MRS2-2-like...    76   2e-12
ref|XP_002520990.1| RNA splicing protein mrs2, mitochondrial, pu...    75   5e-12
ref|NP_850802.2| magnesium transporter MRS2-7 [Arabidopsis thali...    74   1e-11

>ref|XP_002315734.1| magnesium transporter [Populus trichocarpa]
           gi|222864774|gb|EEF01905.1| magnesium transporter
           [Populus trichocarpa]
          Length = 398

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = +2

Query: 185 MSGEGYIVPVNSHA--TLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRVQIHARDFRI 358
           M  +GY+VP +  A  ++ KK   +RSWIL+D+TG+G I+D DKHAIMNRVQIHARD RI
Sbjct: 1   MERDGYVVPADPPAVTSVKKKTQPARSWILVDATGQGTILDADKHAIMNRVQIHARDLRI 60

Query: 359 L 361
           L
Sbjct: 61  L 61


>ref|XP_002311660.1| magnesium transporter [Populus trichocarpa]
           gi|222851480|gb|EEE89027.1| magnesium transporter
           [Populus trichocarpa]
          Length = 394

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/61 (60%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
 Frame = +2

Query: 185 MSGEGYIVPVN--SHATLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRVQIHARDFRI 358
           M+ +GY+VP +  + A + KK   +RSWIL+D+TG+G I+D DKHAIMNRVQIHARD RI
Sbjct: 1   MARDGYVVPADPLAVAAVKKKTHPARSWILVDATGQGTILDADKHAIMNRVQIHARDLRI 60

Query: 359 L 361
           L
Sbjct: 61  L 61


>ref|XP_004150432.1| PREDICTED: magnesium transporter MRS2-2-like [Cucumis sativus]
           gi|449514585|ref|XP_004164422.1| PREDICTED: magnesium
           transporter MRS2-2-like [Cucumis sativus]
          Length = 393

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/61 (59%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
 Frame = +2

Query: 185 MSGEGYIVPVNSHA--TLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRVQIHARDFRI 358
           M+ +G++VPV+     T+ KK   SR+WIL+D TG+G ++DVDKHAIM+RVQIHARD RI
Sbjct: 1   MARDGHVVPVDPQTALTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRI 60

Query: 359 L 361
           L
Sbjct: 61  L 61


>ref|XP_002520990.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus
           communis] gi|223539827|gb|EEF41407.1| RNA splicing
           protein mrs2, mitochondrial, putative [Ricinus communis]
          Length = 392

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/53 (64%), Positives = 43/53 (81%)
 Frame = +2

Query: 203 IVPVNSHATLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRVQIHARDFRIL 361
           +VP    A+L KK ++SRSWIL+DS G+ +I+DVDK+AIM RVQIHARD RIL
Sbjct: 7   VVPAEPQASLKKKTAVSRSWILLDSNGQSSILDVDKYAIMRRVQIHARDLRIL 59


>ref|NP_850802.2| magnesium transporter MRS2-7 [Arabidopsis thaliana]
           gi|332004049|gb|AED91432.1| magnesium transporter MRS2-7
           [Arabidopsis thaliana]
          Length = 397

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = +2

Query: 176 KEEMSGEGYIVPVNSHA--TLMKKVS-ISRSWILIDSTGEGNIVDVDKHAIMNRVQIHAR 346
           + EMS +G +VPV+S A  T  +K S +SRSWI ID+TG+  ++DVDKH IM+RVQIHAR
Sbjct: 9   ESEMSPDGELVPVDSSAVVTAKRKTSQLSRSWISIDATGQKTVLDVDKHVIMHRVQIHAR 68

Query: 347 DFRIL 361
           D RIL
Sbjct: 69  DLRIL 73