BLASTX nr result

ID: Coptis25_contig00032783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032783
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   139   2e-31
ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab...   121   5e-26
ref|XP_002514634.1| conserved hypothetical protein [Ricinus comm...   121   5e-26
ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_004135745.1| PREDICTED: uncharacterized protein LOC101219...   117   1e-24

>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
           gi|297734077|emb|CBI15324.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  139 bits (351), Expect = 2e-31
 Identities = 59/79 (74%), Positives = 74/79 (93%)
 Frame = -2

Query: 273 KGGLGCEVGLRGMIKPSRLRFYNLYVKPYPECEEIFGRFSKDKELRPRHPVGLWKLFKPP 94
           KGGLGC+VGL+G+IKPSRLRFYNLYVKPYPECE++FGRFS+D E+R RHPVGLWKL KP 
Sbjct: 373 KGGLGCKVGLKGLIKPSRLRFYNLYVKPYPECEKMFGRFSRDVEVRNRHPVGLWKLMKPQ 432

Query: 93  KYPDTKEDIRNMKLFMESI 37
           K+P++K+D++NMK F+ES+
Sbjct: 433 KHPESKDDVKNMKCFVESL 451


>ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
           lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein
           ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  121 bits (304), Expect = 5e-26
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = -2

Query: 273 KGGLGCEVGLRGMIKPSRLRFYNLYVKPYPECEEIFGRFSKDKELRPRHPVGLWKLFKPP 94
           KGGLGC++GL+G+IKPS  RFYNLYVKPYPECE IFG+  ++  +  RHP GLWKL KPP
Sbjct: 370 KGGLGCDIGLKGLIKPSMKRFYNLYVKPYPECERIFGKRKENARVNKRHPAGLWKLMKPP 429

Query: 93  KYPDTKEDIRNMKLFMESIS 34
            Y  TKED+ NMK F+ES++
Sbjct: 430 SYLTTKEDVVNMKSFIESLA 449


>ref|XP_002514634.1| conserved hypothetical protein [Ricinus communis]
           gi|223546238|gb|EEF47740.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 450

 Score =  121 bits (304), Expect = 5e-26
 Identities = 52/79 (65%), Positives = 68/79 (86%)
 Frame = -2

Query: 273 KGGLGCEVGLRGMIKPSRLRFYNLYVKPYPECEEIFGRFSKDKELRPRHPVGLWKLFKPP 94
           +GGLG EVGL+GM+K SRL+FYNLYVKPYPEC ++FGR S D +++ +HPVGLWK+FKP 
Sbjct: 371 RGGLGDEVGLKGMMKLSRLKFYNLYVKPYPECGKMFGRLSGDVQVKRQHPVGLWKMFKPQ 430

Query: 93  KYPDTKEDIRNMKLFMESI 37
            +PD+KED++NMK FME +
Sbjct: 431 MHPDSKEDVKNMKSFMEDL 449


>ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|222866206|gb|EEF03337.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = -2

Query: 273 KGGLGCEVGLRGMIKPSRLRFYNLYVKPYPECEEIFGRFSKDKELRPRHPVGLWKLFKP- 97
           KGGLG EVGL+ MIK SRLRFYNLYVKPYPECE++FGRFS D +++ +HP GLWKL KP 
Sbjct: 333 KGGLGNEVGLKAMIKLSRLRFYNLYVKPYPECEKMFGRFSGDVQVKNQHPAGLWKLLKPQ 392

Query: 96  PKYPDTKEDIRNMKLFMESI 37
            + PD+KED++NMK FME +
Sbjct: 393 QRDPDSKEDVKNMKSFMEGL 412


>ref|XP_004135745.1| PREDICTED: uncharacterized protein LOC101219782 [Cucumis sativus]
           gi|449515947|ref|XP_004165009.1| PREDICTED:
           uncharacterized protein LOC101227222 [Cucumis sativus]
          Length = 453

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 273 KGGLGCEVGLRGMIKPSRLRFYNLYVKPYPECEEIFGRFSKDK--ELRPRHPVGLWKLFK 100
           KG LG +VGLR +IKPSRLRFYNL+VKPYP+C ++FG+F+ D   E   RHP+GLWK FK
Sbjct: 372 KGWLGSQVGLREIIKPSRLRFYNLFVKPYPQCGKMFGKFAGDNRTESPSRHPLGLWKAFK 431

Query: 99  PPKYPDTKEDIRNMKLFMESI 37
           PP++P++KEDI NMK FMES+
Sbjct: 432 PPRHPESKEDIENMKSFMESL 452


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