BLASTX nr result

ID: Coptis25_contig00032781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032781
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
gb|EEC84131.1| hypothetical protein OsI_30475 [Oryza sativa Indi...    56   3e-06
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...    55   5e-06

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
 Frame = -1

Query: 242 TDWCIIGDFNNILSPWEKYG---------KPFKQTTSSNALLSFLQQAHLTDLGFHGNTF 90
           T W + GD N +L   EK G         K  K   ++NALL         DLGF G  F
Sbjct: 132 TPWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALL---------DLGFQGPKF 182

Query: 89  TWTNNQRLHTLTKERLDKAYLNTQALQTF 3
           TWTN +   +L KERLD+A +N++ L  F
Sbjct: 183 TWTNGRTGGSLIKERLDRALVNSEWLDLF 211


>gb|EEC84131.1| hypothetical protein OsI_30475 [Oryza sativa Indica Group]
          Length = 296

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = -1

Query: 236 WCIIGDFNNILSPWEKYGKPFKQTTSSNALLSFLQQAHLTDLGFHGNTFTWTNNQR-LHT 60
           W + G+FN IL   EK G   +  +  +     L++  L DLGF G+ FTW NN   +H 
Sbjct: 82  WVVSGNFNEILFSCEKVGGSQRSESLMHNFRDALEECDLHDLGFVGDAFTWRNNHHDVHM 141

Query: 59  LTKERLDKAYLN 24
             KERLD+A  N
Sbjct: 142 YIKERLDRAVAN 153


>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
           gi|241941722|gb|EES14867.1| hypothetical protein
           SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 WCIIGDFNNILSPWEKYGKPFKQTTSSNALLSFLQQAHLTDLGFHGNTFTWTNNQ-RLHT 60
           W   GDFN +L   EK G   +   S +     L+ + L DLGF GN FTW N Q +  +
Sbjct: 380 WLCAGDFNEVLYQHEKEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNKQSKGES 439

Query: 59  LTKERLDKAYLNTQALQTF 3
             +ERLD+A  N + L  F
Sbjct: 440 HIRERLDRAVANFEWLAKF 458


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