BLASTX nr result

ID: Coptis25_contig00032765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032765
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609372.1| WD repeat-containing protein [Medicago trunc...    99   4e-19
ref|XP_002325208.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_003541474.1| PREDICTED: WD repeat-containing protein 11-l...    99   5e-19
ref|XP_002527186.1| nucleotide binding protein, putative [Ricinu...    98   8e-19
ref|XP_004166124.1| PREDICTED: WD repeat-containing protein 11-l...    96   2e-18

>ref|XP_003609372.1| WD repeat-containing protein [Medicago truncatula]
            gi|355510427|gb|AES91569.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 1581

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/54 (88%), Positives = 49/54 (90%)
 Frame = -2

Query: 208  EELWGSASERIPWHEKLEGEEAIQNRVHELVSVGNLEDAVTLLLSTPPEGSYFY 47
            EELW SASERI WHEKLEGEEAIQ RVHELVSVGNLE AV+LLLSTPPE SYFY
Sbjct: 1243 EELWKSASERISWHEKLEGEEAIQKRVHELVSVGNLEAAVSLLLSTPPESSYFY 1296


>ref|XP_002325208.1| predicted protein [Populus trichocarpa] gi|222866642|gb|EEF03773.1|
            predicted protein [Populus trichocarpa]
          Length = 1311

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/54 (87%), Positives = 49/54 (90%)
 Frame = -2

Query: 208  EELWGSASERIPWHEKLEGEEAIQNRVHELVSVGNLEDAVTLLLSTPPEGSYFY 47
            EELW SA ERIPWHEKLEGEEAIQNRVHELVS+GNLE AV+LLLST PE SYFY
Sbjct: 1062 EELWESACERIPWHEKLEGEEAIQNRVHELVSIGNLEAAVSLLLSTSPESSYFY 1115


>ref|XP_003541474.1| PREDICTED: WD repeat-containing protein 11-like [Glycine max]
          Length = 1252

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/54 (87%), Positives = 49/54 (90%)
 Frame = -2

Query: 208  EELWGSASERIPWHEKLEGEEAIQNRVHELVSVGNLEDAVTLLLSTPPEGSYFY 47
            EELW SASERI WHEKLEGEEAIQ R+HELVSVGNLE AV+LLLSTPPE SYFY
Sbjct: 1024 EELWKSASERISWHEKLEGEEAIQKRIHELVSVGNLEAAVSLLLSTPPESSYFY 1077


>ref|XP_002527186.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223533451|gb|EEF35199.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 1357

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = -2

Query: 208  EELWGSASERIPWHEKLEGEEAIQNRVHELVSVGNLEDAVTLLLSTPPEGSYFY 47
            EELW +A+ERIPWHEKLEGEEAIQNRVHELVSVGNLE AV+LLLST P+ SYFY
Sbjct: 1109 EELWENANERIPWHEKLEGEEAIQNRVHELVSVGNLEAAVSLLLSTSPDSSYFY 1162


>ref|XP_004166124.1| PREDICTED: WD repeat-containing protein 11-like, partial [Cucumis
           sativus]
          Length = 844

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = -2

Query: 208 EELWGSASERIPWHEKLEGEEAIQNRVHELVSVGNLEDAVTLLLSTPPEGSYFY 47
           EELW SA+ERIPWHE+L+GEE IQNRVHELVSVGNLE AV+LLLST PE SYFY
Sbjct: 594 EELWESANERIPWHERLDGEEVIQNRVHELVSVGNLEAAVSLLLSTSPESSYFY 647


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