BLASTX nr result

ID: Coptis25_contig00032761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032761
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314751.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-35
ref|XP_002281819.1| PREDICTED: uncharacterized protein LOC100242...   150   2e-34
emb|CAN60832.1| hypothetical protein VITISV_004738 [Vitis vinifera]   150   2e-34
ref|XP_002312489.1| predicted protein [Populus trichocarpa] gi|2...   148   9e-34
ref|XP_003524838.1| PREDICTED: uncharacterized protein LOC100813...   142   4e-32

>ref|XP_002314751.1| predicted protein [Populus trichocarpa] gi|222863791|gb|EEF00922.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  154 bits (389), Expect = 1e-35
 Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3   CLSDITNTSRMQDEDLHFSLGSISS-----GEKRAPEEXXXXXXXXXXXXXX-YMDINKT 164
           CLS IT      DE +  S+ + S       E + PEE               Y D+  T
Sbjct: 111 CLSHITGIRGTSDEPMTTSMSNTSEEANVISEIKTPEEGISAPETLDYSSSSSYKDLAGT 170

Query: 165 SNTLIARDPPYSSACDLRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMPPTRP 344
           ++     + P+SS  D    +R+    VVYPFA+VKPGG EGD+T+NDINERILMPPTRP
Sbjct: 171 NSIFEKDNIPHSSDDDGEKRKRRLGTRVVYPFALVKPGGLEGDMTINDINERILMPPTRP 230

Query: 345 VKHPVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 485
           V+HPVGDFA +P +S DGPGLSGK VV+  R+ TQGRGTITI+RT+G
Sbjct: 231 VRHPVGDFACKPCVSADGPGLSGKAVVALTRVHTQGRGTITIIRTKG 277


>ref|XP_002281819.1| PREDICTED: uncharacterized protein LOC100242197 [Vitis vinifera]
           gi|297737557|emb|CBI26758.3| unnamed protein product
           [Vitis vinifera]
          Length = 283

 Score =  150 bits (379), Expect = 2e-34
 Identities = 87/174 (50%), Positives = 107/174 (61%), Gaps = 13/174 (7%)
 Frame = +3

Query: 3   CLSDITNTSRMQDEDLHFSL--GSISSGEK-----RAPEEXXXXXXXXXXXXXXYMD--I 155
           C++ I +   +  E ++ S   G IS  E      + PEE              Y +  +
Sbjct: 110 CMNQIASIGGVSAEPINGSAMSGMISEEEPTFADMKTPEETVSALEALDSSSSSYKEYSV 169

Query: 156 NKTS----NTLIARDPPYSSACDLRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERI 323
           N  S    +TL + DP   S       ++K    VVYPFAVVKPGG +GD+TLNDINERI
Sbjct: 170 NTKSVSEKDTLCSIDPLPPSTGGDHKKKKKLITRVVYPFAVVKPGGLDGDMTLNDINERI 229

Query: 324 LMPPTRPVKHPVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 485
           LMPPTRPV+HPVGDFASRP +SPDGPGLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 230 LMPPTRPVRHPVGDFASRPFVSPDGPGLSGKAVVALTRIHTQGRGTITIIRTKG 283


>emb|CAN60832.1| hypothetical protein VITISV_004738 [Vitis vinifera]
          Length = 441

 Score =  150 bits (379), Expect = 2e-34
 Identities = 87/174 (50%), Positives = 107/174 (61%), Gaps = 13/174 (7%)
 Frame = +3

Query: 3   CLSDITNTSRMQDEDLHFSL--GSISSGEK-----RAPEEXXXXXXXXXXXXXXYMD--I 155
           C++ I +   +  E ++ S   G IS  E      + PEE              Y +  +
Sbjct: 268 CMNQIASIGGVSAEPINGSAMSGMISEEEPTFADMKTPEETVSALEALDSSSSSYKEYSV 327

Query: 156 NKTS----NTLIARDPPYSSACDLRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERI 323
           N  S    +TL + DP   S       ++K    VVYPFAVVKPGG +GD+TLNDINERI
Sbjct: 328 NTKSVSEKDTLCSIDPLPPSTGGDHKKKKKLITRVVYPFAVVKPGGLDGDMTLNDINERI 387

Query: 324 LMPPTRPVKHPVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 485
           LMPPTRPV+HPVGDFASRP +SPDGPGLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 388 LMPPTRPVRHPVGDFASRPFVSPDGPGLSGKAVVALTRIHTQGRGTITIIRTKG 441


>ref|XP_002312489.1| predicted protein [Populus trichocarpa] gi|222852309|gb|EEE89856.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  148 bits (373), Expect = 9e-34
 Identities = 82/167 (49%), Positives = 102/167 (61%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3   CLSDITNTSRMQDEDLHFSLGSISS-----GEKRAP-EEXXXXXXXXXXXXXXYMDINKT 164
           C+S IT      DE +  S+ + S       E   P E+              Y D+  T
Sbjct: 95  CMSHITGFRGPSDELVSTSVSNTSDEANVISEITTPGEKISAPETLDYSSSSSYKDLAAT 154

Query: 165 SNTLIARDPPYSSACDLRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMPPTRP 344
           ++     + P+S+       R+  A  VVYPFA+VKPGG EGD+T+NDINERILMPPTRP
Sbjct: 155 NSIFEKENSPHSTDDHENKRRKTVATRVVYPFALVKPGGVEGDMTINDINERILMPPTRP 214

Query: 345 VKHPVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 485
           V+HPVGDFA RP +S DGPGLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 215 VRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQGRGTITIIRTKG 261


>ref|XP_003524838.1| PREDICTED: uncharacterized protein LOC100813284 [Glycine max]
          Length = 275

 Score =  142 bits (359), Expect = 4e-32
 Identities = 80/164 (48%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
 Frame = +3

Query: 3   CLSDITNTSRMQDEDLHFSLG---SISSGEKRAPEEXXXXXXXXXXXXXXYMDINKTSNT 173
           C++ I     + DE +  S     +I   + + PEE              Y    K   T
Sbjct: 116 CMNQIERFCGISDEHISTSRSEEANILLADTKTPEETISASESLNSSSSSY----KQPAT 171

Query: 174 LIARDPPYSSACDLRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMPPTRPVKH 353
               DP  +   +     +K    VVYPFA+VKPGG EGDVTLNDINERILMPPTRPV+H
Sbjct: 172 CKTTDPTVAPTENDDMRNKKVVTRVVYPFAMVKPGGREGDVTLNDINERILMPPTRPVRH 231

Query: 354 PVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 485
           PVGDFA RP +S +GPGLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 232 PVGDFACRPCVSAEGPGLSGKAVVALTRIHTQGRGTITIIRTKG 275


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