BLASTX nr result

ID: Coptis25_contig00032753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032753
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]           283   9e-79
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]   281   2e-78
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   280   6e-78
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]               280   6e-78
emb|CAN80061.1| hypothetical protein VITISV_007942 [Vitis vinifera]   279   2e-77

>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score =  283 bits (725), Expect(2) = 9e-79
 Identities = 143/274 (52%), Positives = 189/274 (68%)
 Frame = -3

Query: 900  PNSALPTLIIDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSYCAYLAATDSIRIPRH 721
            P+S+ P+    DL+LPI+ RK KR C + + +A FVSY  +S S    +A+ DSI +P+ 
Sbjct: 818  PSSSDPS---SDLDLPISLRKGKRHCKSIYSIANFVSYDHLSSSSSVLVASIDSISVPKT 874

Query: 720  VSEALEHPSWRVAMFTKMQALEQNHTWEMALLPIGKRVVGCKWGFTVKYIEDGSVERYKA 541
            V+EAL HP W+ AM  ++ ALE NHTW++  LP GK+VVGCKW F VK   DGSV R KA
Sbjct: 875  VTEALNHPGWKNAMLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKA 934

Query: 540  RLVAKGFTQTPGKDFGDTFAPVAKLSSVRLLISLAAQHHWSLHQLDVKNVFLHGDLTEDI 361
            RLVA+G+ QT G D+ DTF+PVAKL+SVRL IS+AA   W +HQLD+KN FLHGDL E++
Sbjct: 935  RLVARGYAQTYGVDYSDTFSPVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEV 994

Query: 360  YMSQPPGFALQGEYSGKVCCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIH 181
            Y+ QPPGF  QGEY GKVC L K++YGLKQSPRAWF +FS  I + G  + E DH+ F  
Sbjct: 995  YLEQPPGFVAQGEY-GKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGMNKSEKDHSVFYK 1053

Query: 180  RSVANLRTIVLVYVXXXXXXXXXXIHIAKVKTYL 79
            +S A +  +++VYV            I+ +KT++
Sbjct: 1054 KSAAGI-ILLVVYVDDIVITGNDHAGISDLKTFM 1086



 Score = 37.7 bits (86), Expect(2) = 9e-79
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -1

Query: 71   FYIKDLGPLRYFLGIEVARSRHG 3
            F+ KDLG L+YFLGIEV+RS+ G
Sbjct: 1090 FHTKDLGELKYFLGIEVSRSKKG 1112


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score =  281 bits (718), Expect(2) = 2e-78
 Identities = 136/244 (55%), Positives = 180/244 (73%)
 Frame = -3

Query: 870  DDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSYCAYLAATDSIRIPRHVSEALEHPSW 691
            DDL +PIA RK  R+C TKHP++ ++SY  +SPS+ A+ +    + IP++V EAL+ P W
Sbjct: 949  DDLNIPIATRKGVRSC-TKHPMSNYMSYKNLSPSFFAFTSHLSLVEIPKNVQEALQVPEW 1007

Query: 690  RVAMFTKMQALEQNHTWEMALLPIGKRVVGCKWGFTVKYIEDGSVERYKARLVAKGFTQT 511
            + A+F +M+ALE+NHTWE+  LP GK  VGCKW FTVKY  +GS+ERYKARLVAKGFTQT
Sbjct: 1008 KKAIFEEMRALEKNHTWEVMGLPKGKTTVGCKWVFTVKYNSNGSLERYKARLVAKGFTQT 1067

Query: 510  PGKDFGDTFAPVAKLSSVRLLISLAAQHHWSLHQLDVKNVFLHGDLTEDIYMSQPPGFAL 331
             G D+ +TFAPVAKL++VR+L+S+AA   W L QLDVKN FL+G+L E++YM  PPGF  
Sbjct: 1068 YGIDYLETFAPVAKLNTVRVLLSIAANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPGF-- 1125

Query: 330  QGEYSGKVCCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIV 151
               +  KVC L KS+YGLKQSPRAWF RF+  + + G+++ +SDHT FI  S      I+
Sbjct: 1126 DEHFGSKVCKLKKSLYGLKQSPRAWFERFTQFVKNQGYVQAQSDHTMFIKHSNDGKIAIL 1185

Query: 150  LVYV 139
            +VYV
Sbjct: 1186 IVYV 1189



 Score = 39.7 bits (91), Expect(2) = 2e-78
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1

Query: 71   FYIKDLGPLRYFLGIEVARSRHG 3
            F IKDLG LRYFLG+EVARS+ G
Sbjct: 1213 FEIKDLGSLRYFLGMEVARSKRG 1235


>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  280 bits (716), Expect(2) = 6e-78
 Identities = 140/279 (50%), Positives = 184/279 (65%)
 Frame = -3

Query: 915  PDLVNPNSALPTLIIDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSYCAYLAATDSI 736
            P L++P+S+  +    D   PIA RK  R+    HP+  F+SY  +SPSY +++ +  S+
Sbjct: 942  PPLMDPSSSSTSPSHSDSHWPIAIRKGTRSTRNPHPIYNFLSYHRLSPSYSSFVFSLSSL 1001

Query: 735  RIPRHVSEALEHPSWRVAMFTKMQALEQNHTWEMALLPIGKRVVGCKWGFTVKYIEDGSV 556
             +P  V EAL+HP WR AM  +MQALE N TWE+  LP GK  VGC+W +TVK   +G V
Sbjct: 1002 TVPSTVREALDHPGWRQAMVDEMQALENNGTWELVPLPPGKTTVGCRWVYTVKVGPNGKV 1061

Query: 555  ERYKARLVAKGFTQTPGKDFGDTFAPVAKLSSVRLLISLAAQHHWSLHQLDVKNVFLHGD 376
            +R KARLVAKG+TQ  G D+GDTF+PVAKL++VRL +++AA  HW LHQLD+KN FLHGD
Sbjct: 1062 DRLKARLVAKGYTQVYGIDYGDTFSPVAKLTTVRLFLAMAAIRHWPLHQLDIKNAFLHGD 1121

Query: 375  LTEDIYMSQPPGFALQGEYSGKVCCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDH 196
            L EDIYM QPPGF  QGEY   VC L +S+YGLKQSPRAWF +FS V+   G  R E+DH
Sbjct: 1122 LEEDIYMEQPPGFVAQGEYD-LVCKLRRSLYGLKQSPRAWFGKFSHVVQMFGLKRSEADH 1180

Query: 195  TCFIHRSVANLRTIVLVYVXXXXXXXXXXIHIAKVKTYL 79
            + F + +       ++VYV            I ++K +L
Sbjct: 1181 SVFYYHTSPGKCVYLMVYVDDIVITGNDTTKIVQLKEHL 1219



 Score = 38.5 bits (88), Expect(2) = 6e-78
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = -1

Query: 89   KHIWAIFYIKDLGPLRYFLGIEVARSRHG 3
            +H+++ F  KDLG L+YFLGIEVA+S  G
Sbjct: 1217 EHLFSHFQTKDLGSLKYFLGIEVAQSGDG 1245


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score =  280 bits (716), Expect(2) = 6e-78
 Identities = 141/281 (50%), Positives = 188/281 (66%)
 Frame = -3

Query: 906  VNPNSALPTLIIDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSYCAYLAATDSIRIP 727
            VNP+   PT   ++L++PIA RK KR C + + +A F+SY  +SP+ C+ +A+ DSI +P
Sbjct: 861  VNPS---PT---ENLDIPIALRKGKRQCPSIYSIANFISYDHLSPTSCSLIASLDSIFVP 914

Query: 726  RHVSEALEHPSWRVAMFTKMQALEQNHTWEMALLPIGKRVVGCKWGFTVKYIEDGSVERY 547
            + V EAL HP W  AM  ++ AL+ NHTW +  LP GK+ VGCKW FT+K   DGS+ R 
Sbjct: 915  KTVREALNHPGWYDAMLDEIHALDDNHTWNLVDLPKGKKAVGCKWVFTIKVNPDGSMARL 974

Query: 546  KARLVAKGFTQTPGKDFGDTFAPVAKLSSVRLLISLAAQHHWSLHQLDVKNVFLHGDLTE 367
            KARLVAKG+ QT G D+ DTF+PVAKL+SVRL ISLAA  +W LHQL +KN FLHGDL E
Sbjct: 975  KARLVAKGYAQTYGVDYSDTFSPVAKLTSVRLFISLAASQNWPLHQLAIKNAFLHGDLQE 1034

Query: 366  DIYMSQPPGFALQGEYSGKVCCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCF 187
            ++YM QPPGF  QGE +GKVC L K +YGLKQSPRAWF +FS V+   G  +   DH+ F
Sbjct: 1035 EVYMEQPPGFVAQGE-NGKVCHLKKPLYGLKQSPRAWFGKFSEVVQKFGLTKSNCDHSVF 1093

Query: 186  IHRSVANLRTIVLVYVXXXXXXXXXXIHIAKVKTYLGNFLY 64
              +S   +  +++VYV            I+ +K +L +  +
Sbjct: 1094 YRQSAVGI-ILLVVYVDDIVITRSDYAGISSLKLFLHSMFH 1133



 Score = 38.5 bits (88), Expect(2) = 6e-78
 Identities = 16/25 (64%), Positives = 22/25 (88%)
 Frame = -1

Query: 77   AIFYIKDLGPLRYFLGIEVARSRHG 3
            ++F+ KDLG L+YFLGIEV+RS+ G
Sbjct: 1130 SMFHTKDLGQLKYFLGIEVSRSKKG 1154


>emb|CAN80061.1| hypothetical protein VITISV_007942 [Vitis vinifera]
          Length = 960

 Score =  279 bits (713), Expect(2) = 2e-77
 Identities = 134/264 (50%), Positives = 183/264 (69%)
 Frame = -3

Query: 870  DDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSYCAYLAATDSIRIPRHVSEALEHPSW 691
            DD + PIA RK  R+C TKHP+  FVSY G+SP +  ++A  D+I++P ++ EAL  P W
Sbjct: 426  DDSDFPIAVRKGVRSC-TKHPIHTFVSYEGLSPKFKTFVANLDNIQVPNNIKEALSSPEW 484

Query: 690  RVAMFTKMQALEQNHTWEMALLPIGKRVVGCKWGFTVKYIEDGSVERYKARLVAKGFTQT 511
            +  ++ ++ ALE+N TWE++ LP+GKR VGCKW FTVKY EDGSV R+KARLVAKGFTQ+
Sbjct: 485  KSIVYEEIHALEKNGTWEISELPVGKRPVGCKWIFTVKYNEDGSVNRFKARLVAKGFTQS 544

Query: 510  PGKDFGDTFAPVAKLSSVRLLISLAAQHHWSLHQLDVKNVFLHGDLTEDIYMSQPPGFAL 331
             G ++ +TFAPVAKL+++++L SLA    W LHQ +VKN FL+GDL E++YM  PPGF  
Sbjct: 545  YGIBYEETFAPVAKLNTIQVLXSLAXNLDWPLHQPBVKNAFLNGDLAEEVYMEIPPGFET 604

Query: 330  QGEYSGKVCCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIV 151
            Q     KVC L +S+YGLKQSPRAWF RF+ V+   G+ +C++DHT F+  S A    + 
Sbjct: 605  Q-TTCNKVCKLRRSLYGLKQSPRAWFERFTKVVKKHGYSQCQTDHTLFVKHSPAGKLVVF 663

Query: 150  LVYVXXXXXXXXXXIHIAKVKTYL 79
            +VYV            I  +K++L
Sbjct: 664  IVYVDGIILVGDYEEEIRTIKSFL 687



 Score = 37.7 bits (86), Expect(2) = 2e-77
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -1

Query: 77  AIFYIKDLGPLRYFLGIEVARSRHG 3
           A F IKDLG L+YFLG+E+A+SR G
Sbjct: 689 AEFEIKDLGNLKYFLGMEIAKSRKG 713


Top