BLASTX nr result

ID: Coptis25_contig00032747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032747
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8...   151   6e-35
ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...   150   8e-35
ref|XP_003529736.1| PREDICTED: ABC transporter C family member 8...   150   1e-34
ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...   148   4e-34
emb|CBI35971.3| unnamed protein product [Vitis vinifera]              148   4e-34

>ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1465

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/106 (66%), Positives = 88/106 (83%)
 Frame = +2

Query: 38  VKIISGDFCWSKDKDTPTLRAIDLEVSKGQKFAVCGPVGAGKSSVLFAILGEIHKISGHI 217
           V+I +G+F W  +  +PTLR ++LE+  GQK AVCGPVGAGKSS+L+A+LGE+ KISG +
Sbjct: 603 VEIQAGNFVWDHESVSPTLRDLNLEIKWGQKVAVCGPVGAGKSSLLYAVLGEVPKISGTV 662

Query: 218 DVSGRIAYVSQTAWIQGGTVRDNVLYGNPMDNTRYEMAIKACALDK 355
           +V G IAYVSQT+WIQGGTV+DN+L+G PMD TRYE AIK CALDK
Sbjct: 663 NVCGTIAYVSQTSWIQGGTVQDNILFGKPMDKTRYENAIKVCALDK 708


>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/106 (65%), Positives = 85/106 (80%)
 Frame = +2

Query: 38  VKIISGDFCWSKDKDTPTLRAIDLEVSKGQKFAVCGPVGAGKSSVLFAILGEIHKISGHI 217
           + +  G F W  +   PTLR ++L++ +GQKFAVCGPVGAGKSS+L+A+LGEI KISG +
Sbjct: 606 ITVEGGKFSWDPELSMPTLREVNLDIKRGQKFAVCGPVGAGKSSLLYAMLGEIPKISGTV 665

Query: 218 DVSGRIAYVSQTAWIQGGTVRDNVLYGNPMDNTRYEMAIKACALDK 355
           +V G IAYVSQT+WIQ GTVRDN+LYG PMD  +YE AIKACALDK
Sbjct: 666 NVFGSIAYVSQTSWIQSGTVRDNILYGKPMDQEKYERAIKACALDK 711


>ref|XP_003529736.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1951

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/106 (65%), Positives = 87/106 (82%)
 Frame = +2

Query: 38   VKIISGDFCWSKDKDTPTLRAIDLEVSKGQKFAVCGPVGAGKSSVLFAILGEIHKISGHI 217
            V+I +G+F W  +   PTLR ++L++ +GQK AVCGPVGAGKSS+LFA+LGE  KISG +
Sbjct: 1087 VEIQAGNFIWDHESVFPTLRDVNLQIEQGQKIAVCGPVGAGKSSLLFAVLGEFPKISGTV 1146

Query: 218  DVSGRIAYVSQTAWIQGGTVRDNVLYGNPMDNTRYEMAIKACALDK 355
            +VSG +AYVSQT+WIQ GTVRDN+L+G PMD TRY+ AIK CALDK
Sbjct: 1147 NVSGTVAYVSQTSWIQSGTVRDNILFGKPMDKTRYDDAIKVCALDK 1192


>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/106 (66%), Positives = 83/106 (78%)
 Frame = +2

Query: 38  VKIISGDFCWSKDKDTPTLRAIDLEVSKGQKFAVCGPVGAGKSSVLFAILGEIHKISGHI 217
           VKI +G F W  +    TLR ++L V +G K A+CGPVGAGKSS+L AILGEI KISG +
Sbjct: 599 VKINAGKFSWEPESAILTLREVNLTVQRGHKIAICGPVGAGKSSLLHAILGEIPKISGTV 658

Query: 218 DVSGRIAYVSQTAWIQGGTVRDNVLYGNPMDNTRYEMAIKACALDK 355
           DV G IAYVSQT+WIQ GT+RDN+LYG PMD T+YE AIKACALDK
Sbjct: 659 DVFGSIAYVSQTSWIQSGTIRDNILYGKPMDTTKYEKAIKACALDK 704


>emb|CBI35971.3| unnamed protein product [Vitis vinifera]
          Length = 2772

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/106 (66%), Positives = 83/106 (78%)
 Frame = +2

Query: 38   VKIISGDFCWSKDKDTPTLRAIDLEVSKGQKFAVCGPVGAGKSSVLFAILGEIHKISGHI 217
            VKI +G F W  +    TLR ++L V +G K A+CGPVGAGKSS+L AILGEI KISG +
Sbjct: 1913 VKINAGKFSWEPESAILTLREVNLTVQRGHKIAICGPVGAGKSSLLHAILGEIPKISGTV 1972

Query: 218  DVSGRIAYVSQTAWIQGGTVRDNVLYGNPMDNTRYEMAIKACALDK 355
            DV G IAYVSQT+WIQ GT+RDN+LYG PMD T+YE AIKACALDK
Sbjct: 1973 DVFGSIAYVSQTSWIQSGTIRDNILYGKPMDTTKYEKAIKACALDK 2018



 Score =  144 bits (363), Expect = 7e-33
 Identities = 72/106 (67%), Positives = 81/106 (76%)
 Frame = +2

Query: 38  VKIISGDFCWSKDKDTPTLRAIDLEVSKGQKFAVCGPVGAGKSSVLFAILGEIHKISGHI 217
           V I  G+F W  +    TLR I+L V +GQ  AVCGPVGAGKSS LFAILGEI KISG +
Sbjct: 568 VVINGGNFSWEPESAVLTLRDINLGVKRGQILAVCGPVGAGKSSFLFAILGEIPKISGSV 627

Query: 218 DVSGRIAYVSQTAWIQGGTVRDNVLYGNPMDNTRYEMAIKACALDK 355
           DV G IAYVSQT+WIQ GT+RDN+L G PMD T+YE AIKACALDK
Sbjct: 628 DVFGSIAYVSQTSWIQSGTIRDNILCGKPMDTTKYEKAIKACALDK 673


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