BLASTX nr result
ID: Coptis25_contig00032723
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032723 (897 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADE75895.1| unknown [Picea sitchensis] 120 3e-25 ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus ... 103 4e-20 ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucum... 96 9e-18 emb|CBI20833.3| unnamed protein product [Vitis vinifera] 95 2e-17 ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis... 95 2e-17 >gb|ADE75895.1| unknown [Picea sitchensis] Length = 445 Score = 120 bits (302), Expect = 3e-25 Identities = 61/181 (33%), Positives = 100/181 (55%) Frame = -3 Query: 649 MAIKDSVLANQDPWRKVDNAIVESILARLPVADFFRCQAVCRRWESVICSPTFKKATKEF 470 ++ +D ++ ++ ++ ++ +LARLPV+ FFR ++VC+ W S++ SP+F A E Sbjct: 49 ISCEDPMIIDKISCGELHEDLLARVLARLPVSSFFRFRSVCKGWNSMMYSPSFLNACSEV 108 Query: 469 SNRLPWFFMLGIKFPSNVVYDMEVDKWRHICLQIHSDAGIPSIPLAASNGLMCCVSRTGM 290 +R PWF+M+ KF +VYD EV+KW HI L + P+A++ L+C S G Sbjct: 109 PSRCPWFYMVDSKFDQGIVYDTEVNKWHHINLPSCLSKNVKCKPVASAGALICFESSLGN 168 Query: 289 LFVCNPLNGSARNIDVVFGTEWFKAITMHARGSSYEVCEICWMVNFLYMRIYSSLSNNWT 110 VCNPL G + + T+ AITM A SY++ I + M++Y S W+ Sbjct: 169 FIVCNPLTGQCCKLPHLKITQTIHAITMVAFKKSYKIILIYGDLPTFVMKVYDSSKQYWS 228 Query: 109 E 107 + Sbjct: 229 Q 229 >ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223544660|gb|EEF46176.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 412 Score = 103 bits (258), Expect = 4e-20 Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 9/175 (5%) Frame = -3 Query: 604 KVDNAIVESILARLPVADFFRCQAVCRRWESVICSPTFKKATKEFSNRLPWFFMLGIKFP 425 +++ ++E +L+ LP + FFR ++VC+RW+SV S +FK A E +R PWFFM+ Sbjct: 31 ELNQDLLERVLSWLPTSTFFRLRSVCKRWKSVADSTSFKFACSEVPSRDPWFFMVDPNLN 90 Query: 424 SNVVYDMEVDKWR---HICLQIHSDAGIPSIPLAASNGLMCCVSRTGMLFVCNPLNGSAR 254 V+D W+ H HS + S+P+AAS GL+C ++G L VCNP+ GS R Sbjct: 91 KWTVFDSAERSWKKLNHPAFLQHSSSNCDSMPVAASGGLVCFRKQSGALIVCNPVTGSCR 150 Query: 253 NI---DVVFGTEWFKAITMHA---RGSSYEVCEICWMVNFLYMRIYSSLSNNWTE 107 + + G++ AI M SY++ + + L R+Y+S +N W E Sbjct: 151 GVPPAHLESGSQSLHAIAMTTYMKNQQSYKLVLVSGELPKLSCRMYNSSANCWDE 205 >ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucumis sativus] gi|449524430|ref|XP_004169226.1| PREDICTED: F-box only protein 13-like [Cucumis sativus] Length = 414 Score = 96.3 bits (238), Expect = 9e-18 Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 11/172 (6%) Frame = -3 Query: 589 IVESILARLPVADFFRCQAVCRRWESVICSPTFKKATKEFSNRLPWFFMLGIKFPSNVVY 410 I+E +L+RLP + FFR +VC+RW+SV S +FK A + S R PWFFM+ ++V+ Sbjct: 39 ILERVLSRLPTSAFFRLSSVCKRWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVF 98 Query: 409 DMEVDKWRHI----CLQIHSDAGIPSIPLAASNGLMCCVSRTGMLFVCNPLNGSARN--- 251 D W+ + LQ H + S+P+AAS GL+C + G V NPL GS Sbjct: 99 DSTEKNWKKLNYPNLLQNHH---LDSMPVAASGGLICFRNSLGNFVVSNPLTGSCSELPP 155 Query: 250 IDVVFGTEWFKAITM----HARGSSYEVCEICWMVNFLYMRIYSSLSNNWTE 107 +D+ + AI M SY++ + V L ++YSS + W E Sbjct: 156 VDLDQKDQSLHAIVMSEDPDGCKGSYKLVLVYGQVPKLRFKVYSSTTGCWDE 207 >emb|CBI20833.3| unnamed protein product [Vitis vinifera] Length = 397 Score = 95.1 bits (235), Expect = 2e-17 Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 10/179 (5%) Frame = -3 Query: 613 PWRKVDNAIVESILARLPVADFFRCQAVCRRWESVICSPTFKKATKEFSNRLPWFFMLGI 434 P ++ ++E +L+ LP + FFR +VC+RW+S+ S TF+ A + +R PWFFM+ Sbjct: 19 PLDDLNQDLLERVLSWLPTSVFFRLTSVCKRWKSIADSATFQLACSQIPSRDPWFFMVDP 78 Query: 433 KFPSNVVYDMEVDKWRHI----CLQIHSDAGIPSIPLAASNGLMCCVSRTGMLFVCNPLN 266 VV+D W+ + LQ++ + I SIP+AA GL+C + +G VCNP+ Sbjct: 79 HLNQWVVFDSAERNWKTLNHPPLLQLNPN--INSIPVAAHGGLICFRNSSGHYIVCNPVT 136 Query: 265 GSARN---IDVVFGTEWFKAITMHARGS---SYEVCEICWMVNFLYMRIYSSLSNNWTE 107 GS R +D + AI M++ + SY++ + ++ L RIY+S N W E Sbjct: 137 GSTRQLPLLDKPPQNQSLHAIAMNSFSTSHHSYKLVLVYGELSSLTFRIYNSSVNLWEE 195 >ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis vinifera] Length = 472 Score = 95.1 bits (235), Expect = 2e-17 Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 10/179 (5%) Frame = -3 Query: 613 PWRKVDNAIVESILARLPVADFFRCQAVCRRWESVICSPTFKKATKEFSNRLPWFFMLGI 434 P ++ ++E +L+ LP + FFR +VC+RW+S+ S TF+ A + +R PWFFM+ Sbjct: 84 PLDDLNQDLLERVLSWLPTSVFFRLTSVCKRWKSIADSATFQLACSQIPSRDPWFFMVDP 143 Query: 433 KFPSNVVYDMEVDKWRHI----CLQIHSDAGIPSIPLAASNGLMCCVSRTGMLFVCNPLN 266 VV+D W+ + LQ++ + I SIP+AA GL+C + +G VCNP+ Sbjct: 144 HLNQWVVFDSAERNWKTLNHPPLLQLNPN--INSIPVAAHGGLICFRNSSGHYIVCNPVT 201 Query: 265 GSARN---IDVVFGTEWFKAITMHARGS---SYEVCEICWMVNFLYMRIYSSLSNNWTE 107 GS R +D + AI M++ + SY++ + ++ L RIY+S N W E Sbjct: 202 GSTRQLPLLDKPPQNQSLHAIAMNSFSTSHHSYKLVLVYGELSSLTFRIYNSSVNLWEE 260