BLASTX nr result

ID: Coptis25_contig00032713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032713
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285311.2| PREDICTED: uncharacterized protein LOC100258...   195   4e-48
ref|XP_002275912.1| PREDICTED: uncharacterized protein LOC100243...   186   3e-45
ref|XP_002525146.1| Transcription factor RF2a, putative [Ricinus...   180   1e-43
emb|CBI20226.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_004144514.1| PREDICTED: uncharacterized protein LOC101205...   168   7e-40

>ref|XP_002285311.2| PREDICTED: uncharacterized protein LOC100258873 [Vitis vinifera]
          Length = 319

 Score =  195 bits (496), Expect = 4e-48
 Identities = 111/183 (60%), Positives = 131/183 (71%), Gaps = 10/183 (5%)
 Frame = +2

Query: 62  MAQLPPKVPNMIPNWSNFPHQKMSSLAN--LIPSHT---THQQHSWIDEFLDFSSVKRGA 226
           MAQLPPKVPNM  NW +FPHQ+M S+A   L+P+ T   T Q  SW+DEFLDFSS +RG+
Sbjct: 1   MAQLPPKVPNMTQNWPSFPHQRMPSMAAPALLPAATATTTSQHPSWVDEFLDFSSSRRGS 60

Query: 227 HRRSASDSIAFLEAP-FVEECTNNAATLRGGDGNNDFERLDDDQLMSMFSDDISGSMPQT 403
           HRRS SDSIAFLEAP  VEE  ++ AT+    G N F+RLDDDQLMSMFSDDIS ++P T
Sbjct: 61  HRRSVSDSIAFLEAPVLVEEARHSHATML--HGANGFDRLDDDQLMSMFSDDISLTVPPT 118

Query: 404 VSSSNPSTPSDHNSNNDEKPTPS----DQQQIKNESAEVQSSCNQDAQAQVPAPCTTNGD 571
           VSSS PSTPSD NSNNDEK        DQQ  KNE  EV+SSC  +  +  P+   +NGD
Sbjct: 119 VSSSGPSTPSDQNSNNDEKGDEKGAALDQQPPKNEPGEVESSCKTELPSFRPS-TASNGD 177

Query: 572 SVI 580
           S+I
Sbjct: 178 SII 180


>ref|XP_002275912.1| PREDICTED: uncharacterized protein LOC100243740 [Vitis vinifera]
           gi|302143381|emb|CBI21942.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  186 bits (471), Expect = 3e-45
 Identities = 98/177 (55%), Positives = 120/177 (67%), Gaps = 4/177 (2%)
 Frame = +2

Query: 62  MAQLPPKVPNMIPNWSNFPHQKMSSLANLIPSHTTHQQHSWIDEFLDFSSVKRGAHRRSA 241
           MAQLPPKVP M  NW +FPHQK+ S+ NL P  T  Q  SW+DEFLDFSS KRG HRRS 
Sbjct: 1   MAQLPPKVPAMAANWPSFPHQKIPSMGNLAPPAT--QNPSWVDEFLDFSSAKRGTHRRSV 58

Query: 242 SDSIAFLEAPFVEECTNNAATLRGGDGNNDFERLDDDQLMSMFSDDISGSMPQTVSSSNP 421
           SDSIAF EAP  ++C N+ A  R     N+F++ DD+Q MSMF+D    +M  T+SSSNP
Sbjct: 59  SDSIAFFEAP--DDCRNSGAAPRPPGAGNEFDQFDDEQFMSMFTD----AMAPTISSSNP 112

Query: 422 STPSDHNSNNDEKPTPSDQQQ----IKNESAEVQSSCNQDAQAQVPAPCTTNGDSVI 580
           STPSDH S N+EK T  +QQQ    +KNES EVQSSC  ++Q       TT+ D ++
Sbjct: 113 STPSDHYSFNEEKTTTIEQQQQQQQLKNESEEVQSSCKLESQTPPQPSMTTSNDRIV 169


>ref|XP_002525146.1| Transcription factor RF2a, putative [Ricinus communis]
           gi|223535605|gb|EEF37273.1| Transcription factor RF2a,
           putative [Ricinus communis]
          Length = 325

 Score =  180 bits (457), Expect = 1e-43
 Identities = 104/197 (52%), Positives = 125/197 (63%), Gaps = 24/197 (12%)
 Frame = +2

Query: 62  MAQLPPKVPNMIPNWSNFPH-QKMSSLANLIPSH------------TTHQQHSWIDEFLD 202
           MAQLPPK+PNM P W  F H QK+ S+  + PS+            TT Q  SW+DEFLD
Sbjct: 1   MAQLPPKIPNMQPTWPEFSHHQKLPSMGIIAPSNNNAAASTAAAAATTTQNPSWVDEFLD 60

Query: 203 FSSVKRGAHRRSASDSIAFLEAPFVEECTNNAATLR--------GGDGNNDFERLDDDQL 358
           FSS +RG HRRS SDSIAFLEAP +EEC    A           G + ++DF++ DD+Q 
Sbjct: 61  FSSARRGTHRRSVSDSIAFLEAPLIEECRAIGAPHHHHHHHHGSGHNSSSDFDKFDDEQF 120

Query: 359 MSMFSDDISGSMPQTVSSSNPSTPSDHNSNNDEK-PTPSD--QQQIKNESAEVQSSCNQD 529
           MSMF+DDIS ++    S SNPSTPSDHNS NDEK PT SD  QQ+I+NES EVQS C  D
Sbjct: 121 MSMFNDDISNAV--APSCSNPSTPSDHNSFNDEKEPTLSDQKQQKIRNESDEVQSQCQTD 178

Query: 530 AQAQVPAPCTTNGDSVI 580
            Q    A  TT+ D +I
Sbjct: 179 TQNPSNATNTTSSDRII 195


>emb|CBI20226.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  174 bits (442), Expect = 7e-42
 Identities = 101/173 (58%), Positives = 121/173 (69%), Gaps = 10/173 (5%)
 Frame = +2

Query: 92  MIPNWSNFPHQKMSSLAN--LIPSHT---THQQHSWIDEFLDFSSVKRGAHRRSASDSIA 256
           M  NW +FPHQ+M S+A   L+P+ T   T Q  SW+DEFLDFSS +RG+HRRS SDSIA
Sbjct: 1   MTQNWPSFPHQRMPSMAAPALLPAATATTTSQHPSWVDEFLDFSSSRRGSHRRSVSDSIA 60

Query: 257 FLEAP-FVEECTNNAATLRGGDGNNDFERLDDDQLMSMFSDDISGSMPQTVSSSNPSTPS 433
           FLEAP  VEE  ++ AT+    G N F+RLDDDQLMSMFSDDIS ++P TVSSS PSTPS
Sbjct: 61  FLEAPVLVEEARHSHATML--HGANGFDRLDDDQLMSMFSDDISLTVPPTVSSSGPSTPS 118

Query: 434 DHNSNNDEKPTPS----DQQQIKNESAEVQSSCNQDAQAQVPAPCTTNGDSVI 580
           D NSNNDEK        DQQ  KNE  EV+SSC  +  +  P+   +NGDS+I
Sbjct: 119 DQNSNNDEKGDEKGAALDQQPPKNEPGEVESSCKTELPSFRPS-TASNGDSII 170


>ref|XP_004144514.1| PREDICTED: uncharacterized protein LOC101205276 [Cucumis sativus]
           gi|449517287|ref|XP_004165677.1| PREDICTED:
           uncharacterized protein LOC101231108 [Cucumis sativus]
          Length = 326

 Score =  168 bits (425), Expect = 7e-40
 Identities = 93/177 (52%), Positives = 117/177 (66%), Gaps = 11/177 (6%)
 Frame = +2

Query: 62  MAQLPPKVPNMIPNWSNFPHQKMSSLANLIPSHTT----HQQHSWIDEFLDFSSVKRGAH 229
           MAQLPPK+PNM  NWS    QK+ S+    P+ TT     Q  SW+DEFLDFSSV+RG+H
Sbjct: 1   MAQLPPKIPNMASNWSELSRQKIPSMETFAPTTTTPPVTQQNPSWVDEFLDFSSVRRGSH 60

Query: 230 RRSASDSIAFLEAPFVEE-CTNNAA----TLRGGDGNNDFERLDDDQLMSMFSDDISGSM 394
           RRS SDSI FLE P +E+ C  +AA    +   GD  N+F+R DD+Q +SMF+D+IS ++
Sbjct: 61  RRSVSDSITFLEMPMLEDDCRASAAPPPPSTATGD-QNEFDRFDDEQFLSMFNDEISAAV 119

Query: 395 PQTVSSSNPSTPSDHNSNNDEKPTPSDQQ--QIKNESAEVQSSCNQDAQAQVPAPCT 559
             T+SSSNPSTPSDHNS NDEK   +D +  Q KNE  EVQS    + Q Q  +  T
Sbjct: 120 APTLSSSNPSTPSDHNSINDEKDAQNDGKVNQNKNEPDEVQSQQQSENQTQSNSTAT 176


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