BLASTX nr result

ID: Coptis25_contig00032709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032709
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332499.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002332499.1| predicted protein [Populus trichocarpa] gi|222832595|gb|EEE71072.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FRFFNYWIDEEGFFEVVQDAWGVSVVGNPMYTFTKKLKNVKNALISWN-REKGKACTRKI 178
           F+FF++W D   F  ++ + W   V G PMY   KKLK VK  L  +N +  GK   R +
Sbjct: 15  FKFFDFWADHPLFLPLIFETWCKKVTGTPMYVLCKKLKIVKGVLKEFNLKYCGKILERML 74

Query: 179 EAXXXXXXXXXXXXXXXXXXXXITHERVITRKYVKAAIEEENECKQKSR 325
           EA                       E ++ ++YV+    EE+  +QKSR
Sbjct: 75  EAKQKMYEAQCRMQTHPSDLDIHKTESILAKEYVRLIEVEESFLRQKSR 123


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