BLASTX nr result

ID: Coptis25_contig00032700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032700
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002530251.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
emb|CBI21533.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811...    76   3e-12

>ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 62/144 (43%), Positives = 80/144 (55%), Gaps = 17/144 (11%)
 Frame = -2

Query: 382 DDPAIIHLRKWDSTK--LDLSKFCEAFISPTRKLLLLLSHQCEVSLLHLTA--------- 236
           + PA++ L KW  ++  +DLS+F E FISPTR+LLLLLS+QCE  LL L A         
Sbjct: 8   ESPAVLQLHKWGPSQFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAGESVSNRVS 67

Query: 235 ---TDDLGRCFDSNSFSSSK*TTLRWLSSLDNIPSTSGSVEDVP---SLESTSPRYEDCS 74
               D+  +C  S +FSS   T        D+IP TS SV+D     SLE    R  +  
Sbjct: 68  EPLNDERLQCRSSAAFSSESWTEPSRSDLKDDIPYTSASVKDFDNGFSLEHEFSRSNNSR 127

Query: 73  LISDVKSLAWGHYGDAYDQHKDVS 2
            + DV SLAWG  GD Y+QHK+ S
Sbjct: 128 FVCDVNSLAWGVCGDTYNQHKEAS 151


>ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 62/139 (44%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
 Frame = -2

Query: 382 DDPAIIHLRKWDSTK--LDLSKFCEAFISPTRKLLLLLSHQCEVSLLHLTATDDLGRCF- 212
           + PAI+ L KW  +K  +DLS+F E FISPTR+LLLLLS+QCE  LL L A + +  C  
Sbjct: 8   ESPAILQLHKWGPSKFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAGESVNNCVS 67

Query: 211 -----DSNSFSSSK*TTLRWLSSL-DNIPSTSGSVEDVP---SLESTSPRYEDCSLISDV 59
                +     SS+  T    S L D+IP +S SV D     SLE+   R  +   + DV
Sbjct: 68  EPVGDERLQCRSSELCTESSRSDLKDDIPCSSASVGDFDNGFSLENGFLRSNNYGFVHDV 127

Query: 58  KSLAWGHYGDAYDQHKDVS 2
            SLAWG  GD Y+QHK+ S
Sbjct: 128 NSLAWGVCGDTYNQHKEAS 146


>ref|XP_002530251.1| conserved hypothetical protein [Ricinus communis]
           gi|223530217|gb|EEF32121.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 63/144 (43%), Positives = 79/144 (54%), Gaps = 17/144 (11%)
 Frame = -2

Query: 382 DDPAIIHLRKWDSTK--LDLSKFCEAFISPTRKLLLLLSHQCEVSLLHLT---ATDD--L 224
           + PAI+ L KW  ++  L+LS+F EAFISPTR+LLLLLSHQCE  LL L    ATDD  L
Sbjct: 9   ESPAILQLYKWGPSQCQLNLSEFREAFISPTRELLLLLSHQCEALLLPLVTGDATDDNIL 68

Query: 223 GRCFD------SNSFSSSK*TT-LRWLSSLDNIPSTSGSVEDVP---SLESTSPRYEDCS 74
               +      S++ SSS+ +T   W  + +NI  T  S  D     S E          
Sbjct: 69  ETVHNDHLQSQSSAASSSQLSTHPSWSDTKENISPTDASATDCENGFSAEDQISTSNSYP 128

Query: 73  LISDVKSLAWGHYGDAYDQHKDVS 2
            I DV SLAWG  GD Y+ H DV+
Sbjct: 129 FICDVNSLAWGVCGDMYNPHDDVT 152


>emb|CBI21533.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 56/136 (41%), Positives = 77/136 (56%), Gaps = 15/136 (11%)
 Frame = -2

Query: 370 IIHLRKWDSTK--LDLSKFCEAFISPTRKLLLLLSHQCEVSLLHL----TATDDLGRCFD 209
           ++ L +W  ++  L+LS+F EAFISPTR+LLLLLS+QCE  LL L    +   D    F+
Sbjct: 1   MLQLHRWSPSQFQLNLSEFREAFISPTRELLLLLSYQCEALLLPLITGNSINSDHPETFN 60

Query: 208 ----SNSFSSSK*TTLRWLS-SLDNIPSTSGSVEDVPS----LESTSPRYEDCSLISDVK 56
                N +SS+   ++   S S +N+P TSGSV  V       E+   +      + DV 
Sbjct: 61  YESLQNPYSSAFSASVPSRSDSRENMPCTSGSVTVVSDNDFLCENNLSKCSGYPFVCDVN 120

Query: 55  SLAWGHYGDAYDQHKD 8
           SLAWG  GD Y+QHKD
Sbjct: 121 SLAWGVCGDNYNQHKD 136


>ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811665 [Glycine max]
          Length = 3260

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
 Frame = -2

Query: 382 DDPAIIHLRKWD--STKLDLSKFCEAFISPTRKLLLLLSHQCEVSLLHLT------ATDD 227
           +DPAI+ L  WD   T++ LS F EAF+SPTR++LLL S++ E  LL L+         +
Sbjct: 51  EDPAILQLHNWDLSETRIGLSDFREAFLSPTREILLLHSYEREALLLPLSKGVLHSGGAE 110

Query: 226 LGRCFDSNSFSS---SK*TTLRWLSSL--DNIPSTSGSVEDVPS--LESTSPRYEDCSLI 68
            G  +++++  S   S   + R   S+  ++ P TSGS  D+ +        +   C  I
Sbjct: 111 GGYDYENHNPGSADVSPEASTRPSESVLVNDSPCTSGSDTDIDTDLAGIKCSKSNSCPYI 170

Query: 67  SDVKSLAWGHYGDAYDQHKDVS 2
           SDV SLAW H  D YDQH D S
Sbjct: 171 SDVNSLAWAHCEDGYDQHNDAS 192


Top