BLASTX nr result

ID: Coptis25_contig00032699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032699
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    60   2e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +3

Query: 6    WASLVWGKLVHPRHSFCTWQLFSNSLQTQDRLIQKKVLEHSQYCFCNNNNENSKHLFFEC 185
            W  +VW K   PRHSF  W      L TQD+L +  +   ++   C  NNE+  HLFFEC
Sbjct: 1215 WHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFEC 1274

Query: 186  PFSKEV 203
             ++K +
Sbjct: 1275 SYTKAI 1280


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/66 (39%), Positives = 37/66 (56%)
 Frame = +3

Query: 6    WASLVWGKLVHPRHSFCTWQLFSNSLQTQDRLIQKKVLEHSQYCFCNNNNENSKHLFFEC 185
            W  +VW K   PRHSF  W +    L TQD+L +  +   ++   C  NNE+  HLFFEC
Sbjct: 875  WHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFEC 934

Query: 186  PFSKEV 203
             ++K +
Sbjct: 935  SYTKAI 940


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/66 (39%), Positives = 37/66 (56%)
 Frame = +3

Query: 6   WASLVWGKLVHPRHSFCTWQLFSNSLQTQDRLIQKKVLEHSQYCFCNNNNENSKHLFFEC 185
           W  +VW K   PRHSF  W +    L TQD+L +  +   ++   C  NNE+  HLFFEC
Sbjct: 160 WHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFEC 219

Query: 186 PFSKEV 203
            ++K +
Sbjct: 220 SYTKAI 225


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 42/79 (53%)
 Frame = +3

Query: 6   WASLVWGKLVHPRHSFCTWQLFSNSLQTQDRLIQKKVLEHSQYCFCNNNNENSKHLFFEC 185
           W   +W   + P  SF TW+L  N L T + L ++  L  S  CFC  + E+S+H+FFEC
Sbjct: 36  WDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFEC 95

Query: 186 PFSKEVLEGIKNFLGINTD 242
                V   + ++LG  TD
Sbjct: 96  ----HVTSRLWDWLGKGTD 110


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +3

Query: 6   WASLVWGKLVHPRHSFCTWQLFSNSLQTQDRLIQKKVLEHSQYCFCNNNNENSKHLFFEC 185
           W  +VW K   PRHSF  W      L TQD+L +  +   ++   C  NNE+  HLFFEC
Sbjct: 342 WHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFEC 401

Query: 186 PFSKEV 203
            ++K +
Sbjct: 402 SYTKAI 407


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