BLASTX nr result
ID: Coptis25_contig00032682
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032682 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 5e-07 gb|AAD37019.2| putative non-LTR retrolelement reverse transcript... 55 6e-06 emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 55 8e-06 >emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1362 Score = 58.5 bits (140), Expect = 5e-07 Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Frame = -1 Query: 215 LEAELKTLYEMEESFWQQKAGYNWV-EGGKNTKFFHLSMIFRKRKNNISKIRDDDLCWKN 39 + +L ++ +EES+W +A N + +G KNTK+FH RKR+N I+++ D++ WK Sbjct: 324 VSGDLDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKK 383 Query: 38 GRDEV 24 GR+E+ Sbjct: 384 GREEI 388 >gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis thaliana] Length = 855 Score = 55.1 bits (131), Expect = 6e-06 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Frame = -1 Query: 218 ELEAELKTLYEMEESFWQQKAGYNWVE-GGKNTKFFHLSMIFRKRKNNISKIRDDDLCWK 42 EL E + E EE W QK+ WVE G +NTK+FH + R+R+N I ++ DD W Sbjct: 737 ELIKEFDVVLEQEEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRIEMLKADDGSWV 796 Query: 41 NGRDEV 24 + + E+ Sbjct: 797 SQQQEL 802 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Frame = -1 Query: 215 LEAELKTLYEMEESFWQQKAGYNWVEGG-KNTKFFHLSMIFRKRKNNISKIRDDDLCWKN 39 L+A + L + EE +W Q++ +W++ G KNTKFFH R+++NN+ +IR++ W Sbjct: 330 LDARMDELEKREEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFE 389 Query: 38 GRDEV 24 D+V Sbjct: 390 DEDDV 394