BLASTX nr result

ID: Coptis25_contig00032680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032680
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]   223   6e-56
emb|CBI23670.3| unnamed protein product [Vitis vinifera]              164   4e-38
ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [...   162   2e-37
ref|XP_002528826.1| Kinesin heavy chain, putative [Ricinus commu...   158   2e-36
ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29

>emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]
          Length = 980

 Score =  223 bits (568), Expect = 6e-56
 Identities = 134/288 (46%), Positives = 180/288 (62%), Gaps = 3/288 (1%)
 Frame = +1

Query: 4    ESTKDPASV*KTRIQNIFQLCGGHRELAQHIRI-PTPCTTKAEFTDVRSSPTAVPNEESV 180
            E+ KD AS  + RIQNIF LCG  RE++ H ++ P  C T     D +SSP     ++S 
Sbjct: 700  ENAKDAASSRRKRIQNIFTLCGNQREISHHTKVAPGRCET----FDPQSSPMKKTGDDSA 755

Query: 181  VKILSKENPPLQ-TAPVPEFGHNYRVLSDVTINNAGETPSSGMEPFAPLKFSNEQNLVES 357
               L +E   +Q +  VPE G   ++  DVT+             FA +K +NEQ L+E+
Sbjct: 756  TTTLPEELLQVQKSGSVPESGIENQIPCDVTVKGIS---------FATVKLANEQKLIEA 806

Query: 358  QLKKGQISFETVGDMKENSMPEEEMITASVQVFVKWEP*KECPGEFITKLKVVKDCTLAD 537
            Q+ + + S +     KEN  P  E   A  +V+VKWE  KE PG+FIT LKV++D +LAD
Sbjct: 807  QMNRSRASDDMALASKENLNPVNEDTGAMTEVYVKWEASKENPGKFITTLKVLRDSSLAD 866

Query: 538  LRKLIEINLDEDTIKQGFSFLMLGDPPGAPVIKEKEATVQASKLPICNNQMNYHLACLRP 717
            LRKLIE++L ED  +Q F+FL+LGDP GAPV +EKEATV+ SKLPICNNQ+  HLACLRP
Sbjct: 867  LRKLIEMHLGEDK-QQAFTFLVLGDPTGAPVPREKEATVRTSKLPICNNQIRGHLACLRP 925

Query: 718  LKIIQRP-NNLPFSSLENKLQVSSKLPSAFKQHVDSFSPKLGQCLSPS 858
            +K IQ P ++LP S LENKL ++    S F Q  D FSP++   L+P+
Sbjct: 926  VKGIQSPAHHLPLSPLENKLPLTPN--SCFMQQGDGFSPQVAHHLTPT 971


>emb|CBI23670.3| unnamed protein product [Vitis vinifera]
          Length = 173

 Score =  164 bits (414), Expect = 4e-38
 Identities = 90/153 (58%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
 Frame = +1

Query: 403 KENSMPEEEMITASVQVFVKWEP*KECPGEFITKLKVVKDCTLADLRKLIEINLDEDTIK 582
           KEN  P  E   A  +V+VKWE  KE PG+FIT LKV++D +LADLRKLIEI+L ED  +
Sbjct: 15  KENLNPVNEDTGAMTEVYVKWEASKENPGKFITTLKVLRDSSLADLRKLIEIHLGEDK-Q 73

Query: 583 QGFSFLMLGDPPGAPVIKEKEATVQASKLPICNNQMNYHLACLRPLKIIQRP-NNLPFSS 759
           Q F+FL+LGDP GAPV +EKEATV+ SKLPICNNQ+  HLACLRP+K IQ P ++LP S 
Sbjct: 74  QAFTFLVLGDPTGAPVPREKEATVRTSKLPICNNQIRGHLACLRPVKGIQSPAHHLPLSP 133

Query: 760 LENKLQVSSKLPSAFKQHVDSFSPKLGQCLSPS 858
           LENKL ++    S F Q  D FSP++   L+P+
Sbjct: 134 LENKLPLTPN--SCFMQQGDGFSPQVAHHLTPT 164


>ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [Vitis vinifera]
          Length = 929

 Score =  162 bits (409), Expect = 2e-37
 Identities = 89/152 (58%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
 Frame = +1

Query: 406  ENSMPEEEMITASVQVFVKWEP*KECPGEFITKLKVVKDCTLADLRKLIEINLDEDTIKQ 585
            EN  P  E   A  +V+VKWE  KE PG+FIT LKV++D +LADLRKLIEI+L ED  +Q
Sbjct: 772  ENLNPVNEDTGAMTEVYVKWEASKENPGKFITTLKVLRDSSLADLRKLIEIHLGEDK-QQ 830

Query: 586  GFSFLMLGDPPGAPVIKEKEATVQASKLPICNNQMNYHLACLRPLKIIQRP-NNLPFSSL 762
             F+FL+LGDP GAPV +EKEATV+ SKLPICNNQ+  HLACLRP+K IQ P ++LP S L
Sbjct: 831  AFTFLVLGDPTGAPVPREKEATVRTSKLPICNNQIRGHLACLRPVKGIQSPAHHLPLSPL 890

Query: 763  ENKLQVSSKLPSAFKQHVDSFSPKLGQCLSPS 858
            ENKL ++    S F Q  D FSP++   L+P+
Sbjct: 891  ENKLPLTPN--SCFMQQGDGFSPQVAHHLTPT 920


>ref|XP_002528826.1| Kinesin heavy chain, putative [Ricinus communis]
            gi|223531738|gb|EEF33560.1| Kinesin heavy chain, putative
            [Ricinus communis]
          Length = 911

 Score =  158 bits (399), Expect = 2e-36
 Identities = 112/297 (37%), Positives = 139/297 (46%), Gaps = 18/297 (6%)
 Frame = +1

Query: 16   DPASV*KTRIQNIFQLCGGHRELAQHIRIPTPCTTKAEFTDVRSSPTAVPNEESVVKILS 195
            D +S    RIQNIF LCG +REL+QH     P T   E T+ +SS    P E+  ++   
Sbjct: 660  DASSSRLVRIQNIFTLCGNYRELSQHSNTRVPATKMFEDTNPQSSLLMTPGEDCAIRNSG 719

Query: 196  KENPPLQTAPVPEFGHNYRVLSDVTINNAGETPSSGMEPFAPLKFSNEQNLVESQLKKGQ 375
            KEN P                                                  ++K  
Sbjct: 720  KENSP--------------------------------------------------IQKNL 729

Query: 376  ISFETVGDMKENSMPEEEMITASVQVFVKWEP*KECPGEFITKLKVVKDCTLADLRKLIE 555
                T+   KEN  P +E     + V VKWE  K   G+FIT LKVVKD TLADLRKLIE
Sbjct: 730  YDIMTLAS-KENHNPSKESNDGQIDVHVKWEASKGNNGKFITTLKVVKDATLADLRKLIE 788

Query: 556  INLDEDTIKQGFSFLMLGDPPGAPVIKEKEATVQASKLPICNNQMNYHLACLRP------ 717
            I L  +   Q FSF++LGDP GAPV KEKE+T+ A KLPICNNQ + +LACLRP      
Sbjct: 789  IYLAAEN--QPFSFIVLGDPTGAPVPKEKESTLHAIKLPICNNQSHGYLACLRPANHLPL 846

Query: 718  ------------LKIIQRPNNLPFSSLENKLQVSSKLPSAFKQHVDSFSPKLGQCLS 852
                        L +    N +P +SLENKL ++    S      D  SPKL Q L+
Sbjct: 847  SPVPATPLESKLLPVTPLENKMPLASLENKLPLTPS--SCSPVQCDGLSPKLAQHLN 901


>ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|222852407|gb|EEE89954.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  135 bits (339), Expect = 2e-29
 Identities = 105/285 (36%), Positives = 129/285 (45%), Gaps = 25/285 (8%)
 Frame = +1

Query: 4    ESTKDPASV*KTRIQNIFQLCGGHRELAQHIRIPTPCTTKAEFTDVRSSPTAVPNEESVV 183
            E++KDPAS    RIQNIF LCG +REL Q  R P P   +   TD               
Sbjct: 701  ENSKDPASSRLLRIQNIFTLCGNNRELCQQFRTPPPAKKRVADTDS-------------- 746

Query: 184  KILSKENPPLQTAPVPEFGHNYRVLSDVTINNAGETPSSGMEPFAPLKFSNEQNLVESQL 363
                      QT P+   G +Y +              +  E + PL  SN+        
Sbjct: 747  ----------QTPPILTDGEDYAL-------------KTSKENYNPLIGSND-------- 775

Query: 364  KKGQISFETVGDMKENSMPEEEMITASVQVFVKWEP*KECPGEFITKLKVVKDCTLADLR 543
                                     + ++V VKWE  K   G+FIT LKV+KD TLADLR
Sbjct: 776  -------------------------SQIEVHVKWEASKGNNGKFITTLKVLKDATLADLR 810

Query: 544  KLIEINLDEDTIKQGFSFLMLG--------------------DPPGAPVIKEKEATVQAS 663
            KLIEI L  D   Q F+FL+LG                    DP GAPV +EKE+TVQA 
Sbjct: 811  KLIEIYLAADN--QAFTFLVLGVSLLACCCFFYGNAINLHVQDPGGAPVPREKESTVQAI 868

Query: 664  KLPICNNQMNYHLACLRPLKIIQRPNNLPFSSL-----ENKLQVS 783
            KLPICNNQ   +LACLRP K  Q  N+LP + L     ENKL ++
Sbjct: 869  KLPICNNQSYGYLACLRPAKGTQGSNHLPATPLPLTPVENKLPLT 913


Top