BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032679
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    64   2e-08
ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|35548...    61   2e-07
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    54   4e-07
ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|35550...    59   5e-07
ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/72 (43%), Positives = 47/72 (65%)
 Frame = +2

Query: 2   FDTMTDEFRAVVQLHPDVAEDSCCIQIEVIDGCLSLLCNFDYEDFVKFEVWVMKDYGLRK 181
           FD  T  F  +    P++ +  C I ++V+ GCL L+ N+D    V+FEVWVMK+YG+++
Sbjct: 28  FDLGTGRFEEIPL--PELTDFKCEIHVDVLGGCLCLIANYDR---VRFEVWVMKEYGVQE 82

Query: 182 SWVKLYTVTGFD 217
           SW+KL TV+  D
Sbjct: 83  SWMKLLTVSQVD 94


>ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|355483442|gb|AES64645.1|
           F-box protein [Medicago truncatula]
          Length = 418

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +2

Query: 38  QLHPDVAEDSCCIQIEVIDGCLSLLCNFDYEDFVKFEVWVMKDYGLRKSWVKLYTV--TG 211
           ++  +V   S  I++  + GCL ++   DY+D  K +VWVMK+YG R+SW KL+TV  + 
Sbjct: 269 EIEEEVNSKSFKIRVAALGGCLCMIV--DYKD-TKIDVWVMKEYGCRESWCKLFTVVKSS 325

Query: 212 FDHPLTELRILETSS 256
           FD PL  LR+L  SS
Sbjct: 326 FDLPLQSLRLLGYSS 340


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 53.9 bits (128), Expect(2) = 4e-07
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +2

Query: 5   DTMTDEFRAVVQLHPDVAEDSCCI-QIEVIDGCLSLLCNFDYEDFVKFEVWVMKDYGLRK 181
           D   + +R V  L PD  ++ C    + V+ GCL +  N+DY+    F VW+MKDYG+R+
Sbjct: 236 DLEKETYREV--LPPDYEKEECSTPSLSVLKGCLCM--NYDYKK-TDFVVWLMKDYGVRE 290

Query: 182 SWVKLYTVTGFDHP 223
           SW+KL T+    +P
Sbjct: 291 SWIKLLTIPYLPNP 304



 Score = 25.4 bits (54), Expect(2) = 4e-07
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 217 SSPYGITNTGN-FITHKLYSGLYDPQDRSYRDINVQG 324
           S PY I+  G   +  +    LYDP+D S+R   ++G
Sbjct: 310 SGPYCISENGEVLLMFEFDLILYDPRDHSFRYPRIEG 346


>ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|355503433|gb|AES84636.1|
           F-box protein [Medicago truncatula]
          Length = 383

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
 Frame = +2

Query: 38  QLHPDVAEDSCCIQIEVIDGCLSLLCNFDYEDFVKFEVWVMKDYGLRKSWVKLYTV--TG 211
           ++  DV  +S  I I V++GCL ++ N+      K +VWVMK+YG R SW KL+T+  + 
Sbjct: 241 EIGEDVNSESFQIGISVLEGCLCMIVNYQT---AKIDVWVMKEYGCRDSWCKLFTLAESC 297

Query: 212 FDHPLTELRILETSS 256
           F  PL  LRIL  SS
Sbjct: 298 FSLPLRALRILGYSS 312


>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/74 (39%), Positives = 46/74 (62%)
 Frame = +2

Query: 2   FDTMTDEFRAVVQLHPDVAEDSCCIQIEVIDGCLSLLCNFDYEDFVKFEVWVMKDYGLRK 181
           FD   + ++ V+Q  PD  E      + V+DGCL ++CN+     V+ + WVMK+YG+R+
Sbjct: 183 FDIKRETYKEVMQ--PDYGELVYDRTLGVLDGCLCVMCNYHA---VRADFWVMKEYGVRE 237

Query: 182 SWVKLYTVTGFDHP 223
           SW++L TV   D+P
Sbjct: 238 SWIRLVTVPYLDYP 251