BLASTX nr result

ID: Coptis25_contig00032669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032669
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28921.3| unnamed protein product [Vitis vinifera]              493   e-137
ref|XP_002278962.1| PREDICTED: formimidoyltransferase-cyclodeami...   490   e-136
ref|XP_002517978.1| formiminotransferase-cyclodeaminase, putativ...   466   e-129
ref|NP_001242582.1| uncharacterized protein LOC100784302 [Glycin...   446   e-123
ref|XP_002329361.1| predicted protein [Populus trichocarpa] gi|2...   442   e-122

>emb|CBI28921.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  493 bits (1268), Expect = e-137
 Identities = 237/319 (74%), Positives = 277/319 (86%)
 Frame = +1

Query: 226  KERRMDFNNSNKKEKTKSMKQQSMLLCCKLYISEARNIATLEAIERAARQNPETVIVNKF 405
            K RR +  + N   K K   +QSMLLCCKLYISE+RN   L++IERAAR + ETVIVNKF
Sbjct: 22   KPRRREEMDLNPGCKDKKSIKQSMLLCCKLYISESRNHTALDSIERAARLDGETVIVNKF 81

Query: 406  KDCAYNRVGWTLVSYVGHDDTGNPIYSPLQQTVLAMAEAAYEAINLEFHLGAHPRLGVVD 585
            +D AYNR+G+TLVSY+ HD TGN IYSPLQQT+L+M EAAYEAINLE H GAHPRLGVVD
Sbjct: 82   QDRAYNRIGYTLVSYIVHDSTGNIIYSPLQQTLLSMVEAAYEAINLELHHGAHPRLGVVD 141

Query: 586  HICFHPLARASLEEAAWLAKLVAADIGSRLQVPVFLYEGAHPTGKPLDTIRRELGYYRPN 765
             I FHPLARASLEEAAW AK+ AADIG++ QVPVFLY+ AHP GKPLD IRRELGYYRPN
Sbjct: 142  DIVFHPLARASLEEAAWFAKMAAADIGNKFQVPVFLYDAAHPMGKPLDIIRRELGYYRPN 201

Query: 766  YMGSQWVGWTLPDILSVKPDEGPTMVSQARGIAVIGASPWFATYNVPIMSTDVSATRRIA 945
            +MG+QW GW +P++LS KPDEGPTMVS+ARGI +IGA PW + YN+PI+STD+SA RRIA
Sbjct: 202  FMGNQWSGWDMPEVLSEKPDEGPTMVSRARGIVMIGARPWVSMYNIPIVSTDISAARRIA 261

Query: 946  RMVSARGGGLPTVQTLGLFHGEDSTEIACVLLEPNQVGADKVQNQVELLAAQEGLEVEKG 1125
            R VSARGGGLPTVQTLGLFHGEDSTEIAC+LLEPN++GAD+VQNQVE+LAAQEGL+VEKG
Sbjct: 262  RTVSARGGGLPTVQTLGLFHGEDSTEIACMLLEPNRIGADRVQNQVEMLAAQEGLDVEKG 321

Query: 1126 YFTDFFPDIVVEKYLELVS 1182
            YFTDF P++++EKYL+L+S
Sbjct: 322  YFTDFSPEMIIEKYLKLIS 340


>ref|XP_002278962.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Vitis
            vinifera]
          Length = 317

 Score =  490 bits (1261), Expect = e-136
 Identities = 236/315 (74%), Positives = 276/315 (87%)
 Frame = +1

Query: 238  MDFNNSNKKEKTKSMKQQSMLLCCKLYISEARNIATLEAIERAARQNPETVIVNKFKDCA 417
            MD N   K +K+    +QSMLLCCKLYISE+RN   L++IERAAR + ETVIVNKF+D A
Sbjct: 1    MDLNPGCKDKKSI---KQSMLLCCKLYISESRNHTALDSIERAARLDGETVIVNKFQDRA 57

Query: 418  YNRVGWTLVSYVGHDDTGNPIYSPLQQTVLAMAEAAYEAINLEFHLGAHPRLGVVDHICF 597
            YNR+G+TLVSY+ HD TGN IYSPLQQT+L+M EAAYEAINLE H GAHPRLGVVD I F
Sbjct: 58   YNRIGYTLVSYIVHDSTGNIIYSPLQQTLLSMVEAAYEAINLELHHGAHPRLGVVDDIVF 117

Query: 598  HPLARASLEEAAWLAKLVAADIGSRLQVPVFLYEGAHPTGKPLDTIRRELGYYRPNYMGS 777
            HPLARASLEEAAW AK+ AADIG++ QVPVFLY+ AHP GKPLD IRRELGYYRPN+MG+
Sbjct: 118  HPLARASLEEAAWFAKMAAADIGNKFQVPVFLYDAAHPMGKPLDIIRRELGYYRPNFMGN 177

Query: 778  QWVGWTLPDILSVKPDEGPTMVSQARGIAVIGASPWFATYNVPIMSTDVSATRRIARMVS 957
            QW GW +P++LS KPDEGPTMVS+ARGI +IGA PW + YN+PI+STD+SA RRIAR VS
Sbjct: 178  QWSGWDMPEVLSEKPDEGPTMVSRARGIVMIGARPWVSMYNIPIVSTDISAARRIARTVS 237

Query: 958  ARGGGLPTVQTLGLFHGEDSTEIACVLLEPNQVGADKVQNQVELLAAQEGLEVEKGYFTD 1137
            ARGGGLPTVQTLGLFHGEDSTEIAC+LLEPN++GAD+VQNQVE+LAAQEGL+VEKGYFTD
Sbjct: 238  ARGGGLPTVQTLGLFHGEDSTEIACMLLEPNRIGADRVQNQVEMLAAQEGLDVEKGYFTD 297

Query: 1138 FFPDIVVEKYLELVS 1182
            F P++++EKYL+L+S
Sbjct: 298  FSPEMIIEKYLKLIS 312


>ref|XP_002517978.1| formiminotransferase-cyclodeaminase, putative [Ricinus communis]
            gi|223542960|gb|EEF44496.1|
            formiminotransferase-cyclodeaminase, putative [Ricinus
            communis]
          Length = 300

 Score =  466 bits (1198), Expect = e-129
 Identities = 228/296 (77%), Positives = 256/296 (86%)
 Frame = +1

Query: 295  MLLCCKLYISEARNIATLEAIERAARQNPETVIVNKFKDCAYNRVGWTLVSYVGHDDTGN 474
            MLLCCKL+ISE+RN   L++IERAAR NPETVIVNKF+D AYNR+ +TLVSYV  D  G 
Sbjct: 1    MLLCCKLFISESRNRTALDSIERAARLNPETVIVNKFEDRAYNRIRYTLVSYVVLDSIGT 60

Query: 475  PIYSPLQQTVLAMAEAAYEAINLEFHLGAHPRLGVVDHICFHPLARASLEEAAWLAKLVA 654
             IYSPLQQTVL M EAAY AINLE H GAHPRLGVVD I FHPL+ ASL+EA+WLAK VA
Sbjct: 61   AIYSPLQQTVLVMVEAAYGAINLESHCGAHPRLGVVDDIVFHPLSWASLDEASWLAKAVA 120

Query: 655  ADIGSRLQVPVFLYEGAHPTGKPLDTIRRELGYYRPNYMGSQWVGWTLPDILSVKPDEGP 834
            A+IGSR QVPVFLY  AH TGK LDTIRRELGYYRPN+MG+QW GWT+PDIL  KPDEGP
Sbjct: 121  AEIGSRFQVPVFLYAAAHSTGKALDTIRRELGYYRPNFMGNQWAGWTMPDILLEKPDEGP 180

Query: 835  TMVSQARGIAVIGASPWFATYNVPIMSTDVSATRRIARMVSARGGGLPTVQTLGLFHGED 1014
              VS+ARGI +IGA PW A YNVPIMSTDVSATR+IARMVSARGGGLPTVQTLGL HGED
Sbjct: 181  QQVSRARGITMIGARPWVALYNVPIMSTDVSATRQIARMVSARGGGLPTVQTLGLVHGED 240

Query: 1015 STEIACVLLEPNQVGADKVQNQVELLAAQEGLEVEKGYFTDFFPDIVVEKYLELVS 1182
            STEIAC+LLEPNQ+GAD+VQ +VE+LAAQEGL+ EKGYFTDF P+++VEKY+ L+S
Sbjct: 241  STEIACMLLEPNQIGADRVQTRVEMLAAQEGLDAEKGYFTDFSPEMIVEKYMNLIS 296


>ref|NP_001242582.1| uncharacterized protein LOC100784302 [Glycine max]
            gi|255640979|gb|ACU20769.1| unknown [Glycine max]
          Length = 318

 Score =  446 bits (1147), Expect = e-123
 Identities = 218/315 (69%), Positives = 257/315 (81%)
 Frame = +1

Query: 238  MDFNNSNKKEKTKSMKQQSMLLCCKLYISEARNIATLEAIERAARQNPETVIVNKFKDCA 417
            M+FN +  KE+ K++  QS+LLCCK ++SE+RN ATL AIERAAR NPETVIVN F D A
Sbjct: 1    MNFNCTANKEQKKTV-DQSILLCCKFFVSESRNNATLNAIERAARSNPETVIVNMFHDRA 59

Query: 418  YNRVGWTLVSYVGHDDTGNPIYSPLQQTVLAMAEAAYEAINLEFHLGAHPRLGVVDHICF 597
            YNR  + LVSYV HD TGNPIYSPL QTV+AMAEA + A+NLEFH GAHPRLG VD I F
Sbjct: 60   YNRARYDLVSYVLHDCTGNPIYSPLHQTVIAMAEATFNAVNLEFHEGAHPRLGAVDDIVF 119

Query: 598  HPLARASLEEAAWLAKLVAADIGSRLQVPVFLYEGAHPTGKPLDTIRRELGYYRPNYMGS 777
            HPL  ASL+EAAWLAK VAADIG+R  VPVFLY  AHPTGK LD IRRELGYYRPN  GS
Sbjct: 120  HPLGHASLDEAAWLAKAVAADIGNRFSVPVFLYAAAHPTGKELDAIRRELGYYRPNSRGS 179

Query: 778  QWVGWTLPDILSVKPDEGPTMVSQARGIAVIGASPWFATYNVPIMSTDVSATRRIARMVS 957
            QW GW +P+ L + PDEGP +VS+A+GI +IGA PW   YNVPI+ TDVS  RRIAR VS
Sbjct: 180  QWAGWAMPETLPLSPDEGPNVVSRAKGITMIGARPWVTLYNVPILCTDVSVARRIARKVS 239

Query: 958  ARGGGLPTVQTLGLFHGEDSTEIACVLLEPNQVGADKVQNQVELLAAQEGLEVEKGYFTD 1137
            ARGGGLPTVQT+ L H EDSTEIAC+LL+  QVGAD+VQN+VE+LAAQEGL++E+GYFTD
Sbjct: 240  ARGGGLPTVQTIALVH-EDSTEIACMLLDSKQVGADRVQNRVEMLAAQEGLDIEQGYFTD 298

Query: 1138 FFPDIVVEKYLELVS 1182
              P+++VEKY++L++
Sbjct: 299  ISPEMIVEKYMKLIN 313


>ref|XP_002329361.1| predicted protein [Populus trichocarpa] gi|222870411|gb|EEF07542.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  442 bits (1137), Expect = e-122
 Identities = 216/296 (72%), Positives = 248/296 (83%)
 Frame = +1

Query: 295  MLLCCKLYISEARNIATLEAIERAARQNPETVIVNKFKDCAYNRVGWTLVSYVGHDDTGN 474
            ML+ C LYISEARN A L+ IERAAR +PE+VIVNKF+D  YNR+ +T+VSYV  D TG+
Sbjct: 1    MLVSCMLYISEARNRAVLDLIERAARLDPESVIVNKFEDRVYNRIRFTIVSYVVVDSTGS 60

Query: 475  PIYSPLQQTVLAMAEAAYEAINLEFHLGAHPRLGVVDHICFHPLARASLEEAAWLAKLVA 654
            PIYSPL QTVLAM EAAY AINLE H GAHPRLGVVD I FHPLARASL+EAAWLAK VA
Sbjct: 61   PIYSPLHQTVLAMVEAAYGAINLELHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKTVA 120

Query: 655  ADIGSRLQVPVFLYEGAHPTGKPLDTIRRELGYYRPNYMGSQWVGWTLPDILSVKPDEGP 834
            ADIGSR QVPVFLY  AHPTG+  DTIRRELGYY PN+MG+QW GWT+P+IL   PDEGP
Sbjct: 121  ADIGSRFQVPVFLYAAAHPTGRAPDTIRRELGYYTPNFMGNQWAGWTIPEILPGAPDEGP 180

Query: 835  TMVSQARGIAVIGASPWFATYNVPIMSTDVSATRRIARMVSARGGGLPTVQTLGLFHGED 1014
            T VS+ RGI +IGA PW A YN+P++ TDVS  R+IARMV AR GGLPTVQ L L HG+D
Sbjct: 181  THVSRTRGIVMIGARPWVALYNIPVVCTDVSTARQIARMVRARDGGLPTVQALALVHGDD 240

Query: 1015 STEIACVLLEPNQVGADKVQNQVELLAAQEGLEVEKGYFTDFFPDIVVEKYLELVS 1182
            S EIAC+LLEPNQVGA++VQ +VE+LAAQEGLEVEKGYFTDF P+++VEKY+ L+S
Sbjct: 241  SFEIACILLEPNQVGAERVQAEVEMLAAQEGLEVEKGYFTDFPPEMIVEKYMNLIS 296


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