BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032662
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...   101   6e-20
emb|CAN81716.1| hypothetical protein VITISV_032903 [Vitis vinifera]   100   1e-19
emb|CBI37123.3| unnamed protein product [Vitis vinifera]               99   3e-19
emb|CAN78715.1| hypothetical protein VITISV_030863 [Vitis vinifera]    99   3e-19
emb|CAN83455.1| hypothetical protein VITISV_029958 [Vitis vinifera]    99   3e-19

>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
            gi|7267797|emb|CAB81200.1| putative retrotransposon
            polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/115 (45%), Positives = 69/115 (60%)
 Frame = -2

Query: 353  KSKKQNVTSRSSAEAEYRAMAQGTCELLWLRSTYDELGFPMGPSSKLFCDNNSAIMLASD 174
            KSKKQ+V SRSS E+EYR++AQ TCE++WL+    +L   M   +KLFCDN SA+ LA++
Sbjct: 914  KSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLATN 973

Query: 173  FVLHEQTKHIEVDIHXXXXXXXXXXXXXXXXXXXKQTTDMFTKPVGPSLIDIFAL 9
             V HE+TKHIE+D H                    Q  D+ TKP+ P    IF+L
Sbjct: 974  PVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHPVQSPIFSL 1028


>emb|CAN81716.1| hypothetical protein VITISV_032903 [Vitis vinifera]
          Length = 1170

 Score =  100 bits (249), Expect = 1e-19
 Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
 Frame = -2

Query: 353  KSKKQNVTSRSSAEAEYRAMAQGTCELLWLRSTYDELGFPMGPSSKLFCDNNSAIMLASD 174
            KSKKQ+V +RSSAEAEYRAMA  TCEL+WLR    EL F      KL CDN +A+ +AS+
Sbjct: 1045 KSKKQDVVARSSAEAEYRAMALATCELIWLRQLLQELRFGKDEQIKLVCDNQTALHIASN 1104

Query: 173  FVLHEQTKHIEVDIHXXXXXXXXXXXXXXXXXXXKQTTDMFTKPV-GPSL 27
             V HE+TKHIEVD H                    Q  D+FTK + GP +
Sbjct: 1105 LVFHERTKHIEVDCHFIREKIASGCVATSFANSNDQLADIFTKSLRGPRI 1154


>emb|CBI37123.3| unnamed protein product [Vitis vinifera]
          Length = 2295

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
 Frame = -2

Query: 353  KSKKQNVTSRSSAEAEYRAMAQGTCELLWLRSTYDELGFPMGPSSKLFCDNNSAIMLASD 174
            KSKKQ+V +RSSAEAEYRAMA  TCEL+WLR    EL F      KL CDN +A+ +AS+
Sbjct: 1485 KSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASN 1544

Query: 173  FVLHEQTKHIEVDIHXXXXXXXXXXXXXXXXXXXKQTTDMFTKPV-GPSL 27
             V HE+TKHIEVD H                    Q  D+FTK + GP +
Sbjct: 1545 PVFHERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRI 1594


>emb|CAN78715.1| hypothetical protein VITISV_030863 [Vitis vinifera]
          Length = 1228

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
 Frame = -2

Query: 353  KSKKQNVTSRSSAEAEYRAMAQGTCELLWLRSTYDELGFPMGPSSKLFCDNNSAIMLASD 174
            KSKKQ+V +RSSAEAEYRAMA  TCEL+WLR    EL F      KL CDN +A+ +AS+
Sbjct: 1103 KSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASN 1162

Query: 173  FVLHEQTKHIEVDIHXXXXXXXXXXXXXXXXXXXKQTTDMFTKPV-GPSL 27
             V HE+TKHIEVD H                    Q  D+FTK + GP +
Sbjct: 1163 PVFHERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRI 1212


>emb|CAN83455.1| hypothetical protein VITISV_029958 [Vitis vinifera]
          Length = 459

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
 Frame = -2

Query: 353 KSKKQNVTSRSSAEAEYRAMAQGTCELLWLRSTYDELGFPMGPSSKLFCDNNSAIMLASD 174
           KSKKQ+V +RSSAEAEYRAMA  TCEL+WLR    EL F      KL CDN +A+ +AS+
Sbjct: 334 KSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASN 393

Query: 173 FVLHEQTKHIEVDIHXXXXXXXXXXXXXXXXXXXKQTTDMFTKPV-GPSL 27
            V HE+TKHIEVD H                    Q  D+FTK + GP +
Sbjct: 394 PVFHERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRI 443