BLASTX nr result

ID: Coptis25_contig00032649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032649
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC36443.1| GH3-1 [Castanea sativa]                                175   3e-42
gb|AFC36444.1| GH3-1 [Quercus robur]                                  175   4e-42
pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid...   169   2e-40
ref|XP_002271252.1| PREDICTED: probable indole-3-acetic acid-ami...   169   2e-40
gb|ADK27717.1| GH3 [Dimocarpus longan]                                167   8e-40

>gb|AFC36443.1| GH3-1 [Castanea sativa]
          Length = 603

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/113 (76%), Positives = 96/113 (84%)
 Frame = -3

Query: 341 DPYMVYTSPDEAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNWQQ 162
           DPYMVYTSPDEAILC+DSFQS+YTQMLCGL   +EVLR+GAVFASGLLRAI FLQLNW++
Sbjct: 193 DPYMVYTSPDEAILCADSFQSLYTQMLCGLLMREEVLRLGAVFASGLLRAIRFLQLNWKE 252

Query: 161 LTHDIATGTLNPKITDPSIRECILNRSPFFKPNPTLAEFITNACSIGSWEGII 3
           L HDI+TGTLN KITDPS+REC+   S   KPNP LAEFIT  CS  +WEGII
Sbjct: 253 LAHDISTGTLNSKITDPSLRECM---SKIVKPNPELAEFITKECSGENWEGII 302


>gb|AFC36444.1| GH3-1 [Quercus robur]
          Length = 603

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/113 (75%), Positives = 96/113 (84%)
 Frame = -3

Query: 341 DPYMVYTSPDEAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNWQQ 162
           DPY VYTSPDEAILC+DSFQS+YTQMLCGL   +EVLR+GAVFASGLLRAI FLQLNW++
Sbjct: 193 DPYTVYTSPDEAILCADSFQSLYTQMLCGLLMREEVLRLGAVFASGLLRAIRFLQLNWKE 252

Query: 161 LTHDIATGTLNPKITDPSIRECILNRSPFFKPNPTLAEFITNACSIGSWEGII 3
           L HDI+TGTLNPKITDPS++EC+   S   KPNP LAEFIT  CS  +WEGII
Sbjct: 253 LAHDISTGTLNPKITDPSLKECM---SKIVKPNPELAEFITKECSGENWEGII 302


>pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid Amido
           Synthase From Vitis Vinifera Involved In Auxin
           Homeostasis gi|430800812|pdb|4B2G|B Chain B, Crystal
           Structure Of An Indole-3-acetic Acid Amido Synthase From
           Vitis Vinifera Involved In Auxin Homeostasis
          Length = 609

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/113 (70%), Positives = 93/113 (82%)
 Frame = -3

Query: 341 DPYMVYTSPDEAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNWQQ 162
           DPY VYTSP+EAILC+DSFQSMYTQMLCG+Y  K+VLR+GAVFASGLLRAI FLQLNW Q
Sbjct: 188 DPYNVYTSPNEAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQ 247

Query: 161 LTHDIATGTLNPKITDPSIRECILNRSPFFKPNPTLAEFITNACSIGSWEGII 3
           LTHDI TGTL+PKITDPS+R C+   +   KP+P LA+ +   CS  +WEGII
Sbjct: 248 LTHDIRTGTLSPKITDPSVRNCV---AGVLKPDPELADLVAGECSKDNWEGII 297


>ref|XP_002271252.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1
           [Vitis vinifera]
          Length = 598

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/113 (70%), Positives = 93/113 (82%)
 Frame = -3

Query: 341 DPYMVYTSPDEAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNWQQ 162
           DPY VYTSP+EAILC+DSFQSMYTQMLCG+Y  K+VLR+GAVFASGLLRAI FLQLNW Q
Sbjct: 188 DPYNVYTSPNEAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQ 247

Query: 161 LTHDIATGTLNPKITDPSIRECILNRSPFFKPNPTLAEFITNACSIGSWEGII 3
           LTHDI TGTL+PKITDPS+R C+   +   KP+P LA+ +   CS  +WEGII
Sbjct: 248 LTHDIRTGTLSPKITDPSVRNCV---AGVLKPDPELADLVAGECSKDNWEGII 297


>gb|ADK27717.1| GH3 [Dimocarpus longan]
          Length = 598

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/113 (71%), Positives = 95/113 (84%)
 Frame = -3

Query: 341 DPYMVYTSPDEAILCSDSFQSMYTQMLCGLYHNKEVLRVGAVFASGLLRAIGFLQLNWQQ 162
           DP+ +YTSP+EAILC+DSFQSMYTQMLCGL   +EVLRVGAVFASGLLRAI FLQLNW+Q
Sbjct: 188 DPFNIYTSPNEAILCADSFQSMYTQMLCGLLMREEVLRVGAVFASGLLRAIRFLQLNWKQ 247

Query: 161 LTHDIATGTLNPKITDPSIRECILNRSPFFKPNPTLAEFITNACSIGSWEGII 3
           L  DI+TG+LNPKITDPS+R+C+   +   KPNP LAEFIT  CS  +W+GII
Sbjct: 248 LADDISTGSLNPKITDPSLRDCM---TKILKPNPELAEFITKECSGENWDGII 297


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