BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032621
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containi...   163   1e-58
ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-56
ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-55
ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containi...   152   1e-53
ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containi...   150   3e-53

>ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  163 bits (412), Expect(2) = 1e-58
 Identities = 80/117 (68%), Positives = 95/117 (81%)
 Frame = -3

Query: 496 EDGLKLFRKMVGLGVKPNPSSFSSVLLGCSNLSALELGKQVHQYACKSPLYFNTTVGTSL 317
           E+GLKLF++MV  G +PNPSS SSVLLGCSNLSAL+LGKQVHQ  CKSP+ +N T GTSL
Sbjct: 209 ENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSL 268

Query: 316 LSMYCKCGELDDAGKLFGEVRQKDIVSWNSMISGYA*HGFGRKALGLFGEMNRRRVK 146
           LSMYCKCG+L+DA KLF  + QKD+V+WN+MISGYA HG G KAL LF +M    +K
Sbjct: 269 LSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMK 325



 Score = 89.0 bits (219), Expect(2) = 1e-58
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = -2

Query: 158 EKSQADWITFVAVLSACNHAGLVDLGVQYFDSMETEYGIEARPDHYACIVDL 3
           E  + DWITFVAVLSACNHAG VDLG++YF+SM  +YG+EA+PDHY C+VDL
Sbjct: 322 EGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDL 373


>ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|222840806|gb|EEE78353.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  162 bits (411), Expect(2) = 4e-56
 Identities = 77/117 (65%), Positives = 95/117 (81%)
 Frame = -3

Query: 496 EDGLKLFRKMVGLGVKPNPSSFSSVLLGCSNLSALELGKQVHQYACKSPLYFNTTVGTSL 317
           EDG+KLFR MVG G++PN S+ SS LLGCS LSAL+LG+QVHQ  CKSPL  +TT GTSL
Sbjct: 179 EDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSL 238

Query: 316 LSMYCKCGELDDAGKLFGEVRQKDIVSWNSMISGYA*HGFGRKALGLFGEMNRRRVK 146
           +SMYCKCG L+D  KLF +V ++D+V+WN+MISGYA HG G+KALGLF EM  + +K
Sbjct: 239 ISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMK 295



 Score = 80.5 bits (197), Expect(2) = 4e-56
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = -2

Query: 143 DWITFVAVLSACNHAGLVDLGVQYFDSMETEYGIEARPDHYACIVDL 3
           DWITFVAVL ACNHAG  DLGV+YF SM  +YG+ A+PDHY C+VDL
Sbjct: 297 DWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDL 343


>ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  155 bits (392), Expect(2) = 2e-55
 Identities = 76/117 (64%), Positives = 92/117 (78%)
 Frame = -3

Query: 496 EDGLKLFRKMVGLGVKPNPSSFSSVLLGCSNLSALELGKQVHQYACKSPLYFNTTVGTSL 317
           EDGL+LFR M+  GVKPN  S +SVLLGCSNLSAL+LGKQVHQ  CK PL  +TT GTSL
Sbjct: 245 EDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSL 304

Query: 316 LSMYCKCGELDDAGKLFGEVRQKDIVSWNSMISGYA*HGFGRKALGLFGEMNRRRVK 146
           +SMY KCG+L DA +LF ++ +KD+V WN+MISGYA HG G+KAL LF EM +  +K
Sbjct: 305 VSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLK 361



 Score = 85.5 bits (210), Expect(2) = 2e-55
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = -2

Query: 158 EKSQADWITFVAVLSACNHAGLVDLGVQYFDSMETEYGIEARPDHYACIVDL 3
           E  + DWITFVAVL ACNHAGLVDLGVQYF++M  ++GIE +P+HYAC+VDL
Sbjct: 358 EGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDL 409


>ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  152 bits (383), Expect(2) = 1e-53
 Identities = 75/117 (64%), Positives = 91/117 (77%)
 Frame = -3

Query: 496 EDGLKLFRKMVGLGVKPNPSSFSSVLLGCSNLSALELGKQVHQYACKSPLYFNTTVGTSL 317
           EDGLK+F+ M+   V+PNP S SSVLLGCSNLSAL LG+Q+HQ   KSPL  +TT  TSL
Sbjct: 277 EDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSL 336

Query: 316 LSMYCKCGELDDAGKLFGEVRQKDIVSWNSMISGYA*HGFGRKALGLFGEMNRRRVK 146
           +SMYCKCG+LD A KLF E+ +KD++SWN+MISGYA HG GRKAL LF +M    +K
Sbjct: 337 ISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393



 Score = 83.2 bits (204), Expect(2) = 1e-53
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -2

Query: 143 DWITFVAVLSACNHAGLVDLGVQYFDSMETEYGIEARPDHYACIVDL 3
           DWITFVAV+ ACNHAG VDLGVQYF SM+ E+GIEA+P HY C++DL
Sbjct: 395 DWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDL 441


>ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  150 bits (380), Expect(2) = 3e-53
 Identities = 74/117 (63%), Positives = 91/117 (77%)
 Frame = -3

Query: 496 EDGLKLFRKMVGLGVKPNPSSFSSVLLGCSNLSALELGKQVHQYACKSPLYFNTTVGTSL 317
           EDGLK+F+ M+   V+PNP S SSVLLGCSNLSAL LG+Q+HQ   KSPL  +TT  TSL
Sbjct: 277 EDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSL 336

Query: 316 LSMYCKCGELDDAGKLFGEVRQKDIVSWNSMISGYA*HGFGRKALGLFGEMNRRRVK 146
           +SMYCKCG+LD A KLF E+ +KD+++WN+MISGYA HG GRKAL LF +M    +K
Sbjct: 337 ISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393



 Score = 83.2 bits (204), Expect(2) = 3e-53
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -2

Query: 143 DWITFVAVLSACNHAGLVDLGVQYFDSMETEYGIEARPDHYACIVDL 3
           DWITFVAV+ ACNHAG VDLGVQYF SM+ E+GIEA+P HY C++DL
Sbjct: 395 DWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDL 441