BLASTX nr result

ID: Coptis25_contig00032618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032618
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17984.3| unnamed protein product [Vitis vinifera]               79   1e-17
ref|XP_002316616.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-17
gb|ADQ37372.1| unknown [Arabidopsis lyrata]                            79   2e-16
gb|ABD59322.1| S locus receptor kinase [Brassica rapa subsp. cam...    78   5e-16
ref|XP_002886974.1| hypothetical protein ARALYDRAFT_475686 [Arab...    76   8e-16

>emb|CBI17984.3| unnamed protein product [Vitis vinifera]
          Length = 1004

 Score = 79.0 bits (193), Expect(2) = 1e-17
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = -1

Query: 339  LGYAWRLWSENKGSELIDPLLVNEARSDVKDVIKCIHLGLLCVQEDATDRPSMASVVIML 160
            LGYAWRLW ENK  +L+D  L      DV + ++C+++GLLCVQED +DRP M++VV +L
Sbjct: 902  LGYAWRLWQENKALDLMDQSL--HETCDVAEFLRCVNVGLLCVQEDPSDRPVMSNVVFLL 959

Query: 159  TSETMDLNTQK 127
             SET  L T K
Sbjct: 960  GSETATLPTPK 970



 Score = 35.8 bits (81), Expect(2) = 1e-17
 Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 137  TPKKPAFFIRESLL-TQSSSSGPDNCSKNELTASMLEGR 24
            TPK+PAF +R  +  T SSSS P+ C+ NELT S ++GR
Sbjct: 968  TPKQPAFTVRRGVFSTASSSSKPETCT-NELTVS-VDGR 1004


>ref|XP_002316616.1| predicted protein [Populus trichocarpa] gi|222859681|gb|EEE97228.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 79.3 bits (194), Expect(2) = 3e-17
 Identities = 37/71 (52%), Positives = 52/71 (73%)
 Frame = -1

Query: 339 LGYAWRLWSENKGSELIDPLLVNEARSDVKDVIKCIHLGLLCVQEDATDRPSMASVVIML 160
           L +AW+LWS+ +G EL+DP+L  E      +V++CIH+GLLCVQED  DRP+M+SV+ ML
Sbjct: 278 LTFAWKLWSDGQGLELMDPML--EKSGVATEVLRCIHIGLLCVQEDPADRPTMSSVLHML 335

Query: 159 TSETMDLNTQK 127
            S+T+ L   K
Sbjct: 336 ASDTITLPIPK 346



 Score = 33.9 bits (76), Expect(2) = 3e-17
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -2

Query: 134 PKKPAFFIRESLLTQSSSSGPDNCSKNELTASMLEGR 24
           PK+PAF I   +  +  SS    CS NELT S+L  R
Sbjct: 345 PKQPAFSIGRFVAMEGQSSNQKVCSSNELTISVLSPR 381


>gb|ADQ37372.1| unknown [Arabidopsis lyrata]
          Length = 861

 Score = 79.0 bits (193), Expect(2) = 2e-16
 Identities = 33/64 (51%), Positives = 48/64 (75%)
 Frame = -1

Query: 339 LGYAWRLWSENKGSELIDPLLVNEARSDVKDVIKCIHLGLLCVQEDATDRPSMASVVIML 160
           LG  WR W E KG E++DP++++ + S   ++++CI +GLLCVQE A DRP M++VV+ML
Sbjct: 752 LGCVWRNWKEGKGLEIVDPIIIDSSSSPPHEILRCIQIGLLCVQERAEDRPIMSAVVLML 811

Query: 159 TSET 148
            SET
Sbjct: 812 GSET 815



 Score = 31.2 bits (69), Expect(2) = 2e-16
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = -2

Query: 134 PKKPAFFIRESLLTQSSSSG----PDNCSKNELTASMLEGR 24
           PK P + +  SLL   SSS      ++C+ N++T S++E R
Sbjct: 821 PKPPGYCVGRSLLDSDSSSSKQRDDESCTVNQITLSVIEAR 861


>gb|ABD59322.1| S locus receptor kinase [Brassica rapa subsp. campestris]
          Length = 817

 Score = 78.2 bits (191), Expect(2) = 5e-16
 Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = -1

Query: 339 LGYAWRLWSENKGSELIDPLLVNEARSDV---KDVIKCIHLGLLCVQEDATDRPSMASVV 169
           LG+ WR W E KG E++DP++++++ S V    ++++CI +GLLCVQE A DRP M++V+
Sbjct: 706 LGFVWRYWKEGKGIEIVDPIIIDDSSSAVLRTHEILRCIQIGLLCVQERAEDRPVMSTVM 765

Query: 168 IMLTSET 148
           +ML SET
Sbjct: 766 VMLGSET 772



 Score = 30.8 bits (68), Expect(2) = 5e-16
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -2

Query: 134 PKKPAFFIRESLLTQSSSSGP---DNCSKNELTASMLEGR 24
           PK+P F +  SLL   SSS     D  S N++T S+++ R
Sbjct: 778 PKRPGFCVGRSLLETESSSSTQRGDEVSVNQITLSVIDAR 817


>ref|XP_002886974.1| hypothetical protein ARALYDRAFT_475686 [Arabidopsis lyrata subsp.
           lyrata] gi|297332815|gb|EFH63233.1| hypothetical protein
           ARALYDRAFT_475686 [Arabidopsis lyrata subsp. lyrata]
          Length = 776

 Score = 75.9 bits (185), Expect(2) = 8e-16
 Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -1

Query: 339 LGYAWRLWSENKGSELIDPLLVNEARSDVK--DVIKCIHLGLLCVQEDATDRPSMASVVI 166
           LG+ WR W E KG E++DP+ ++ + S ++  ++++CI +GLLCVQE A DRP M+SV++
Sbjct: 666 LGFVWRHWKEGKGLEIVDPINIDSSPSTLRTHEILRCIQIGLLCVQERAEDRPVMSSVMV 725

Query: 165 MLTSETMDLNTQK 127
           +L SET  +   K
Sbjct: 726 LLGSETTAITQPK 738



 Score = 32.3 bits (72), Expect(2) = 8e-16
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -2

Query: 143 ILTPKKPAFFIRESLLTQSSSSGP---DNCSKNELTASMLEGR 24
           I  PK+P F I  S L   SSS     D C+ N++T S+++ R
Sbjct: 734 ITQPKRPGFCIGRSPLEADSSSSTQRGDECTVNQITVSVIDAR 776


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