BLASTX nr result

ID: Coptis25_contig00032612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032612
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21583.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002334300.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002307039.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
gb|ABK96170.1| unknown [Populus trichocarpa]                          108   3e-22
ref|XP_002277730.1| PREDICTED: uncharacterized protein LOC100247...   108   6e-22

>emb|CBI21583.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/67 (73%), Positives = 59/67 (88%)
 Frame = -3

Query: 293 PLAGGSEVLQDESSDPVIESAVKGLKVKILDITAISQLRDEGHLSKYTIRPTEGMQDCLH 114
           PL GGSEV ++ES DPVI +AVKG K+K+LDITAISQLRDE H+S+Y+I+ TEG+ DCLH
Sbjct: 235 PLTGGSEVGEEESRDPVIANAVKGTKIKLLDITAISQLRDEAHISRYSIKATEGVWDCLH 294

Query: 113 WCLPGIP 93
           WCLPGIP
Sbjct: 295 WCLPGIP 301


>ref|XP_002334300.1| predicted protein [Populus trichocarpa] gi|222870938|gb|EEF08069.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  108 bits (271), Expect = 3e-22
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = -3

Query: 293 PLAGGSEVLQDESSDPVIESAVKGLKVKILDITAISQLRDEGHLSKYTIRPTEGMQDCLH 114
           PL GGSE+ QDESSDPVI +AVKG  + +LDITA+S+LRDEGH+S+Y+++ T G+ DCLH
Sbjct: 271 PLTGGSEISQDESSDPVIAAAVKGTNITLLDITALSELRDEGHISRYSVKATTGVNDCLH 330

Query: 113 WCLPGIP 93
           WCLPGIP
Sbjct: 331 WCLPGIP 337


>ref|XP_002307039.1| predicted protein [Populus trichocarpa] gi|222856488|gb|EEE94035.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  108 bits (271), Expect = 3e-22
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = -3

Query: 293 PLAGGSEVLQDESSDPVIESAVKGLKVKILDITAISQLRDEGHLSKYTIRPTEGMQDCLH 114
           PL GGSE+ QDESSDPVI +AVKG  + +LDITA+S+LRDEGH+S+Y+++ T G+ DCLH
Sbjct: 263 PLTGGSEISQDESSDPVIAAAVKGTNITLLDITALSELRDEGHISRYSVKATTGVNDCLH 322

Query: 113 WCLPGIP 93
           WCLPGIP
Sbjct: 323 WCLPGIP 329


>gb|ABK96170.1| unknown [Populus trichocarpa]
          Length = 312

 Score =  108 bits (271), Expect = 3e-22
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = -3

Query: 293 PLAGGSEVLQDESSDPVIESAVKGLKVKILDITAISQLRDEGHLSKYTIRPTEGMQDCLH 114
           PL GGSE+ QDESSDPVI +AVKG  + +LDITA+S+LRDEGH+S+Y+++ T G+ DCLH
Sbjct: 235 PLTGGSEISQDESSDPVIAAAVKGTNITLLDITALSELRDEGHISRYSVKATTGVNDCLH 294

Query: 113 WCLPGIP 93
           WCLPGIP
Sbjct: 295 WCLPGIP 301


>ref|XP_002277730.1| PREDICTED: uncharacterized protein LOC100247308 [Vitis vinifera]
           gi|297738542|emb|CBI27787.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = -3

Query: 293 PLAGGSEVLQDESSDPVIESAVKGLKVKILDITAISQLRDEGHLSKYTIRPTEGMQDCLH 114
           PL+ G EVL+DES DPV  +AVKG +VK+LDITA SQLRDEGH+S+Y+IR T G+QDCLH
Sbjct: 442 PLSDGKEVLKDESLDPVAVAAVKGTRVKLLDITASSQLRDEGHISRYSIRATPGVQDCLH 501

Query: 113 WCLPGIP 93
           WCLPGIP
Sbjct: 502 WCLPGIP 508


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