BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032609
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]    77   1e-12
emb|CBI27273.3| unnamed protein product [Vitis vinifera]               76   3e-12

>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -2

Query: 319 WLFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSV 170
           WLFELEP NTGNY+L++KLY+A+GRWEDAENVR R++D  LRK P  S +
Sbjct: 620 WLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669


>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 28/59 (47%), Positives = 46/59 (77%)
 Frame = -2

Query: 316 LFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGMGHEYI 140
           LFELEP+N+G Y+L+S +Y+  GRW+D   +R ++NDK ++K PGC+S+ + G+ HE++
Sbjct: 559 LFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFL 617


>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/55 (61%), Positives = 44/55 (80%)
 Frame = -2

Query: 319 WLFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGM 155
           WLFELEP NTGNY+L++ +YSAVGRW DAE+VR+ +N+  LRKTP  S + VR +
Sbjct: 622 WLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/55 (61%), Positives = 44/55 (80%)
 Frame = -2

Query: 319 WLFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGM 155
           WLFELEP NTGNY+L++ +YSAVGRW DAE+VR+ +N+  LRKTP  S + VR +
Sbjct: 622 WLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676


>emb|CBI27273.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/59 (49%), Positives = 44/59 (74%)
 Frame = -2

Query: 316 LFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGMGHEYI 140
           LFELEP+N G Y+L+S +Y+  GRW+D   +R ++NDK ++K PGCSS+ V  + HE++
Sbjct: 259 LFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFL 317