BLASTX nr result
ID: Coptis25_contig00032609
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032609 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2... 78 7e-13 ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-12 ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-12 emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera] 77 1e-12 emb|CBI27273.3| unnamed protein product [Vitis vinifera] 76 3e-12 >ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa] Length = 676 Score = 78.2 bits (191), Expect = 7e-13 Identities = 34/50 (68%), Positives = 42/50 (84%) Frame = -2 Query: 319 WLFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSV 170 WLFELEP NTGNY+L++KLY+A+GRWEDAENVR R++D LRK P S + Sbjct: 620 WLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669 >ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Glycine max] Length = 736 Score = 77.4 bits (189), Expect = 1e-12 Identities = 28/59 (47%), Positives = 46/59 (77%) Frame = -2 Query: 316 LFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGMGHEYI 140 LFELEP+N+G Y+L+S +Y+ GRW+D +R ++NDK ++K PGC+S+ + G+ HE++ Sbjct: 559 LFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFL 617 >ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350 [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera] Length = 676 Score = 77.4 bits (189), Expect = 1e-12 Identities = 34/55 (61%), Positives = 44/55 (80%) Frame = -2 Query: 319 WLFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGM 155 WLFELEP NTGNY+L++ +YSAVGRW DAE+VR+ +N+ LRKTP S + VR + Sbjct: 622 WLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676 >emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera] Length = 676 Score = 77.4 bits (189), Expect = 1e-12 Identities = 34/55 (61%), Positives = 44/55 (80%) Frame = -2 Query: 319 WLFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGM 155 WLFELEP NTGNY+L++ +YSAVGRW DAE+VR+ +N+ LRKTP S + VR + Sbjct: 622 WLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676 >emb|CBI27273.3| unnamed protein product [Vitis vinifera] Length = 340 Score = 75.9 bits (185), Expect = 3e-12 Identities = 29/59 (49%), Positives = 44/59 (74%) Frame = -2 Query: 316 LFELEPDNTGNYILMSKLYSAVGRWEDAENVRMRINDKKLRKTPGCSSVGVRGMGHEYI 140 LFELEP+N G Y+L+S +Y+ GRW+D +R ++NDK ++K PGCSS+ V + HE++ Sbjct: 259 LFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFL 317